Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 116 5e-21
seq418 86.0 8e-12
>seq1351
Length=133559
Score = 116 bits (128), Expect = 5e-21
Identities = 222/320 (69%), Gaps = 13/320 (4%)
Strand=Plus/Plus
Query 104992 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGA 105051
|||||| ||||| || | ||||| ||||||||| | ||| |||||| |||||| ||
Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288
Query 105052 C-TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAG---AAA 105107
| ||| ||| || || || || |||| ||||| ||| | ||||| ||| | |
Sbjct 104289 CATGTT-TACTGATTACACTGGTAAAGGAATAGATCAACT---TCAAGATATCATCAACA 104344
Query 105108 CTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAAT 105167
| || ||||| || || ||| |||| || || | ||||||| | | ||
Sbjct 104345 CAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCC-TATCGAT 104403
Query 105168 -TATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAAA 105226
|| || | ||||| |||||||| ||||||||||| | || || || | ||| |
Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463
Query 105227 ATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATAT 105286
| | ||| |||||||| |||||||||||||| ||| | || |||||||| |||| |
Sbjct 104464 A---AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTT 104520
Query 105287 AATATTGGTTTCTATTCATT 105306
||||||| | ||||||||
Sbjct 104521 AATATTGCTAGTTATTCATT 104540
>seq418
Length=203716
Score = 86.0 bits (94), Expect = 8e-12
Identities = 89/116 (77%), Gaps = 3/116 (3%)
Strand=Plus/Minus
Query 152442 TTTTTGAAAGGAAATCATGGTGATAATTGGCCTTTTGATGGACCCGGACAAATTTTAGCT 152501
||||| | ||| ||||||| ||| | || |||||||||| || ||||| || ||
Sbjct 106645 TTTTTCAGAGGTTATCATGGAGATGGATACCCATTTGATGGACGGGGCCAAATATTGGCC 106586
Query 152502 CATGCATTTTTTCCTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGA 152557
||||||||||||||||| ||| || |||||||||| |||||||| ||||||
Sbjct 106585 CATGCATTTTTTCCTGGAAGTGGGAGGGGAGGAGATGCCCATTTTGA---TGAAGA 106533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658213209526600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |