Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1351 116 5e-21 seq418 86.0 8e-12 >seq1351 Length=133559 Score = 116 bits (128), Expect = 5e-21 Identities = 222/320 (69%), Gaps = 13/320 (4%) Strand=Plus/Plus Query 104992 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGA 105051 |||||| ||||| || | ||||| ||||||||| | ||| |||||| |||||| || Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288 Query 105052 C-TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAG---AAA 105107 | ||| ||| || || || || |||| ||||| ||| | ||||| ||| | | Sbjct 104289 CATGTT-TACTGATTACACTGGTAAAGGAATAGATCAACT---TCAAGATATCATCAACA 104344 Query 105108 CTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAAT 105167 | || ||||| || || ||| |||| || || | ||||||| | | || Sbjct 104345 CAATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCC-TATCGAT 104403 Query 105168 -TATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAAA 105226 || || | ||||| |||||||| ||||||||||| | || || || | ||| | Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463 Query 105227 ATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATAT 105286 | | ||| |||||||| |||||||||||||| ||| | || |||||||| |||| | Sbjct 104464 A---AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTT 104520 Query 105287 AATATTGGTTTCTATTCATT 105306 ||||||| | |||||||| Sbjct 104521 AATATTGCTAGTTATTCATT 104540 >seq418 Length=203716 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/116 (77%), Gaps = 3/116 (3%) Strand=Plus/Minus Query 152442 TTTTTGAAAGGAAATCATGGTGATAATTGGCCTTTTGATGGACCCGGACAAATTTTAGCT 152501 ||||| | ||| ||||||| ||| | || |||||||||| || ||||| || || Sbjct 106645 TTTTTCAGAGGTTATCATGGAGATGGATACCCATTTGATGGACGGGGCCAAATATTGGCC 106586 Query 152502 CATGCATTTTTTCCTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGA 152557 ||||||||||||||||| ||| || |||||||||| |||||||| |||||| Sbjct 106585 CATGCATTTTTTCCTGGAAGTGGGAGGGGAGGAGATGCCCATTTTGA---TGAAGA 106533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658213209526600