Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1333 289 2e-72 seq353 215 4e-50 seq595 201 9e-46 seq259 116 3e-20 seq3419 102 7e-16 seq283 91.5 1e-12 >seq1333 Length=128596 Score = 289 bits (320), Expect = 2e-72 Identities = 558/812 (69%), Gaps = 22/812 (3%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTA--TCATGGTGTGTT 551846 ||| ||| ||||| | ||||| ||||||||||| ||| | | || |||| || | | Sbjct 15641 TGGTGATACTCATTTGGGTGGTGAAGATTTTGACAATCGGTTAGTCACTCATT-TG-GCT 15584 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAAAGCTCTTCGTCG 551905 || || || ||||||||| | ||| ||| | | | || | | | |||| |||| || Sbjct 15583 GAGGAATTCAAACGAAAATATAAAAAAGATATGACCGTCAA-TCCAAGAGCTATTCGACG 15525 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTAT 551965 || | || ||| ||| ||||||||||| ||||||| || ||| || ||| ||| Sbjct 15524 ACTTCGTACAGCTGCCGAGCGAGCCAAACGAACTCTTTCTTCATCTACAGAAGCCAGTAT 15465 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATT 552025 |||| ||||| | | | || || ||||||| |||| || ||| | || || Sbjct 15464 TGAAATAGATGCTCTCTACGAAGGTATTGATTTCTATACAAAAATATCGCGAGCTCGCTT 15405 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 |||||| ||||||||||||| || | |||| || |||| || ||| ||| | | Sbjct 15404 TGAAGAACTTTGTTCTGATCTTTTCCGTTCAACACTTCAACCCGTTGAAAAAGCTCTGCA 15345 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| | || | || || | | ||||| | || ||||| ||||| || ||| | Sbjct 15344 AGACGCTAAACTCGACAAGAGCGCTATTCATGATGTAGTACTTGTGGGTGGTTCAACACG 15285 Query 552146 AATTCCTAAAATTCGCGAAATG-----TTAAGTTCTTATTTCAATGGTAAAAAATTAAAT 552200 || || ||| | | ||| || || ||| || | ||||||| || ||| Sbjct 15284 TATACCCAAAGTAC----AATCCCTCCTTCAGAACTTCTT-CTGTGGTAAATCTTTGAAT 15230 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 | ||||| ||||| ||||||||||||||||| ||| | |||||||| |||||| Sbjct 15229 CTTTCAATAAATCCTGATGAAGCTGTTGCCTATGGTGCAGCAGTCCAAGCAGCAATTCTT 15170 Query 552261 TCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTA 552317 |||| |||| | | | | | ||| || | | || ||||||||||| || || Sbjct 15169 AGTGGAGATCAAA--GCTCAGCCATT-CAAGATGTACTTCTGGTAGATGTTACACCACTC 15113 Query 552318 TCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT 552377 |||||||| ||||||| | ||||||| |||||||||| |||||||| | || || Sbjct 15112 TCTCTTGGAATAGAAACTGCTGGAGGTGTTATGACTAAACTTATCGAACGTAACACGCGC 15053 Query 552378 ATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 ||||| |||||| || ||| ||| | ||||| | || |||||| | |||||||| Sbjct 15052 ATTCCATGTAAACAAACTCAAACATTCACAACGTACGCGGACAATCAACCGGCTGTTACT 14993 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 ||||| | || ||||||||| || | || ||||| || ||| || || || ||| Sbjct 14992 GTTCAAGTGTTCGAAGGAGAACGAGCGATGACGAAAGACAACAATTTGCTCGGCACATTT 14933 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 || || ||||||||||| || || ||||| ||||| || |||| || || |||||| Sbjct 14932 GATCTAACCGGTATTCCTCCAGCACCACGTGGCGTACCTAAAGTTGATGTCACATTCGAT 14873 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||| ||||| ||| | ||||| || || Sbjct 14872 CTCGATGCAAATGGTATTCTAAATGTAACAGC 14841 >seq353 Length=486561 Score = 215 bits (238), Expect = 4e-50 Identities = 568/857 (66%), Gaps = 24/857 (3%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||| ||| ||||| || | ||||| ||||| ||||| | ||||| |||||| Sbjct 368455 GAAGACGGTATCTTTGAGGTGAAATCTACTGCCGGAGACACTCATTTGGGTGGTGAAGAT 368514 Query 551817 TTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTG 551874 || ||||| | |||| |||| | || |||| || ||||||||| ||||| | Sbjct 368515 TTCGATAACCGTATGGTCAATCAC--TTCGTCCAAGAGTTCAAACGAAAATACAAAAAAG 368572 Query 551875 ATCTATCTACATCTGCCAAA---GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCA 551931 | || ||| | |||| || ||||||||| | ||||| || || ||| | || | Sbjct 368573 ACCTCACTAG---TAACAAACGAGCCCTTCGTCGTTTGAGAACAGCCTGTGAACGTGCAA 368629 Query 551932 AACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAA 551991 | || ||||||| || |||||| ||| ||||||| | || || | ||||| || Sbjct 368630 AGAGAACTCTTTCCTCATCCACTCAAGCCAGTATTGAAATCGACTCTCTCTTTGAAGGTG 368689 Query 551992 TTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTA 552051 | |||| | || | || | | |||| |||||||| | |||| || || Sbjct 368690 TCGATTTCTACACTTCCATCACTCGTGCCAGGTTTGAAGAGTTAAACGCTGACCTTTTCC 368749 Query 552052 GAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAG 552111 | ||| || ||||| || || || | |||| | || || || ||| | || Sbjct 368750 GTGGAACCATGGAACCTGTTGAGAAATCACTCCGAGACGCCAAAATGGACAAAGCACAAA 368809 Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT-- 552169 | || || ||||| ||||| ||||| ||||| | ||||||||| | | || | | Sbjct 368810 TCCACGATATTGTCCTTGTCGGTGGCTCTACCCGTATTCCTAAAGTGCAGAAACTTCTGC 368869 Query 552170 AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGC 552229 ||| ||| || ||| || ||| || | || || | || || ||||| ||||| || Sbjct 368870 AAGA-CTTCTT-CAACGGAAAAGAACTGAACAAATCCATCAACCCTGATGAAGCTGTCGC 368927 Query 552230 CTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT-GGACAAACTGATGAAAAACTACAAA 552288 ||| ||||| || | ||||| || || ||| | ||| | | |||| || ||||| Sbjct 368928 CTACGGTGCTGCTGTCCAAGCCGCCAT-CTTACACGGAGACAAAAGTGAAGAAGTACAAG 368986 Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348 || || | | | || || |||||||| ||| | ||| | ||||| | ||||||| | | Sbjct 368987 ATCTTCTCTTATTGGACGTCACTCCTCTGTCTTTGGGTATCGAAACTGCTGGAGGTGTCA 369046 Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 |||| || || | ||||| || || |||||| |||| || ||| ||| | | Sbjct 369047 TGACAGCCCTCATTAAAAGAAACACCACCATTCCTACTAAACAAACTCAGACGTTTACCA 369106 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468 | || || || || ||| ||| ||| |||||| | | ||||||||| | | | Sbjct 369107 CCTACTCCGACAACCAACCTGGTGTGTTGATTCAAGTCTACGAAGGAGAACGTGCCATGA 369166 Query 552469 CTAAAGATAATAATCAACTTGGT----ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524 | |||||||| ||||||| | | || | | | ||||| || ||||| Sbjct 369167 CCAAAGATAA----CAACTTGTTGGGCAAGTTCGAGCTGACATCCATTCCGCCAGCTCCC 369222 Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584 ||||| || || ||||| |||||||| |||||||||||||| || || ||| |||| || Sbjct 369223 CGTGGTGTTCCCCAAATCGAAGTTACATTCGATATCGATGCTAACGGTATTCTGAACGTC 369282 Query 552585 ACTGCTTGTGATAAATC 552601 |||||| ||| || || Sbjct 369283 ACTGCTATTGAGAAGTC 369299 Score = 140 bits (154), Expect = 3e-27 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || || || ||||| || |||||||| |||| ||| |||| ||| Sbjct 363865 GCAATTGGAATTGACTTGGGTACCACCTACTCATGTGTTGGAGTTTTCCAACATGGCAAA 363924 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||| ||||||||||||||||| ||||| || || || |||||| ||||||| Sbjct 363925 GTTGAAATCATTGCCAATGATCAAGGAAACAGGACAACACCCAGTTATGTCGCTTTCACC 363984 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||||| | | |||||||||| || || |||||| | | ||||||| ||| Sbjct 363985 GACACTGAACGTCTTATTGGTGATGCCGCTAAGAATCAAGTCGCCATGAATCCTAACAAC 364044 Query 550172 ACTATTTTTG 550181 |||||||||| Sbjct 364045 ACTATTTTTG 364054 Score = 109 bits (120), Expect = 4e-18 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 550334 TCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGT 550392 || || |||||| | | |||||||| |||| ||| || | |||| ||||| ||| Sbjct 367449 TCCTCCATGGTTCTCACTAAAATGAAGGAAACCGCCGAAGCCTACCTTGG-CAAGACAGT 367507 Query 550393 TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAA 550452 | | || || || || || ||||| || || |||||||||||||| ||||| || || Sbjct 367508 GTCCAACGCTGTCATCACCGTGCCAGCCTACTTCAATGACTCACAACGCCAAGCCACCAA 367567 Query 550453 AGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGC 550512 ||| |||| ||||| ||| | |||||| | ||||| ||||| ||||| ||||| || Sbjct 367568 AGACTCTGGTACCATTGCAGGATTGAATGTTTTGCGTATCATCAACGAACCCACTGCCGC 367627 Query 550513 TGCACTTGCATATGGACTTGATAA 550536 || |||| |||||| | || || Sbjct 367628 AGCCATTGCTTATGGATTAGACAA 367651 >seq595 Length=237055 Score = 201 bits (222), Expect = 9e-46 Identities = 273/381 (72%), Gaps = 0/381 (0%) Strand=Plus/Plus Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCG 550219 ||||| | || || | |||||||| ||| | || ||||| |||| ||| |||| | Sbjct 97304 AATCCAAAAAACACCGTCTTTGATGCAAAAAGATTGATTGGCAGAAAATTTGATGACACC 97363 Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279 | | || | |||||| || || ||||| ||| | | || | || |||||| ||||| Sbjct 97364 AAAATACAAGAAGATATCAAACACTGGCCATTCACAGTCGTCAGTGATTCTGGTAAACCC 97423 Query 550280 TATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCT 550339 | || ||| | || |||| | ||| | ||| |||| ||| |||| || Sbjct 97424 AAAATACAAGTTGAATATAAAGGCGAAATCAAAAAGTTTGCACCGGAAGAAATAAGCTCA 97483 Query 550340 ATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGAT 550399 |||||||||| ||||||||| ||| || || || | || ||||||| || Sbjct 97484 ATGGTTTTAACAAAAATGAAAGAAATTGCAGATGTTTACCTCGGAGGCAAAGTTACAGAA 97543 Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || ||||| ||||||||||| |||||||| || ||| | ||||| |||||||||||| Sbjct 97544 GCTGTCATAACCGTACCAGCATACTTTAATGATTCCCAAAGACAAGCAACTAAAGATGCT 97603 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | ||||||||||| |||||||||||||| ||||||||||| || ||||| || | Sbjct 97604 GGTAGCATTGCTGGACTCAATGTTCTTCGTATCATCAATGAACCGACAGCTGCAGCTTTG 97663 Query 550520 GCATATGGACTTGATAAACAT 550540 || |||||| | || ||| || Sbjct 97664 GCTTATGGATTAGACAAAAAT 97684 Score = 131 bits (144), Expect = 1e-24 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || |||||||| || || || ||| ||||||||||||||||||| |||| ||| Sbjct 75004 GCTATTGGAATAGATTTGGGTACAACTTATTCTTGTGTTGGTGTTTGGCAACATGGAAAA 75063 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || || ||||||||||| || ||||| || ||||| |||||| | || | Sbjct 75064 GTAGAAATCATAGCAAATGATCAAGGCAATAGAACCACCCCATCATATGTTGCGTTTAAT 75123 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 || || |||| ||| |||| ||||| || || Sbjct 75124 GACACAGAACGATTAATTGGAGATGCCGCTAA 75155 Score = 89.7 bits (98), Expect = 4e-12 Identities = 151/217 (70%), Gaps = 9/217 (4%) Strand=Plus/Minus Query 361628 ACATCGAGTGTTCCTGCACCTAAATCATATATGATAATATTCCCCCCGTTTTTATTTTTC 361687 ||||| | |||||| | |||||||| | || | |||||| | ||| | |||| Sbjct 97740 ACATCAAAAGTTCCTCCTCCTAAATCGAAAATCAGAATATTTC-----TTTCTCCTTTT- 97687 Query 361688 CAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTA 361747 || ||| || || |||||||| || | |||||||| ||||| || || || | Sbjct 97686 --AGATTTTTGTCTAAT-CCATAAGCCAAAGCTGCAGCTGTCGGTTCATTGATGATACGA 97630 Query 361748 ATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTA 361807 | |||||||||||| || || | |||||| ||| ||||| | ||| | ||||||| Sbjct 97629 AGAACATTGAGTCCAGCAATGCTACCAGCATCTTTAGTTGCTTGTCTTTGGGAATCATTA 97570 Query 361808 AAATATGCAGGAACAGTAATCACTGCTTTTTCAACTT 361844 || ||||| || || || || || |||| | ||||| Sbjct 97569 AAGTATGCTGGTACGGTTATGACAGCTTCTGTAACTT 97533 >seq259 Length=588930 Score = 116 bits (128), Expect = 3e-20 Identities = 95/113 (84%), Gaps = 3/113 (3%) Strand=Plus/Minus Query 563278 GTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCG 563337 |||| || |||| ||| |||||||| | ||||||||| |||||| | ||||||||| Sbjct 399531 GTACCTT-TTTG--AATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCT 399475 Query 563338 GCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 ||||| || | |||||| |||||||| |||||||||||||||||||||||||| Sbjct 399474 GCAAAGATCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTT 399422 >seq3419 Length=33272 Score = 102 bits (112), Expect = 7e-16 Identities = 118/158 (75%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 550380 TTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 |||| ||||| || || |||| || | || || ||||| || || |||||| | || Sbjct 23851 TTGGGGAAGAAAGTAACTCATGCCGTTGTCACCGTCCCAGCCTACTTCAATGACGCTCAG 23910 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 | | || || |||||||||||| ||||||||| | |||||| | | ||||| ||| Sbjct 23911 AGACGTGCCACCAAAGATGCTGGAGTTATTGCTGGTTTGAATGTTATGAGAATTATTAAT 23970 Query 550499 GAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||||||| ||||| |||| |||||| | ||||| Sbjct 23971 GAACCTACTGCAGCTGCTATTGCCTATGGATTGGATAA 24008 >seq283 Length=431334 Score = 91.5 bits (100), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 368933 GGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATG 368992 ||||||| || | | || |||| ||||| ||||| ||||||| | ||||||||| Sbjct 421748 GGTTTTACACATTGCTCGTTATATCGACAGCACTTTTCAATAAACCTCCATTTAAAAATT 421689 Query 368993 TAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTA 369052 | |||| || ||| | ||| ||||||||||| ||||| |||||||||||||| | Sbjct 421688 TGATAGCAAATGGATTGGTTTTGGCATCTGATGGACAAAAAATGTCAAAAAGTAAAAAGA 421629 Query 369053 ATTATTCCGATCC 369065 ||||| | ||||| Sbjct 421628 ATTATCCTGATCC 421616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028075161086650