Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq207 100 2e-16 seq259 87.8 2e-12 >seq207 Length=511460 Score = 100 bits (110), Expect = 2e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| ||| |||||||||| || || |||||||| |||||| ||||| | | || Sbjct 361990 GATCAGCAGCGACTTATCTTCGCCGGAAAACAATTAGAAGATGACAAAACCCTATCTGAC 361931 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||||||||||||||| || || || ||||||| |||||||| || || Sbjct 361930 TATAACATTCAAAAAGAATCCACACTCCATTTGGTATTGAGATTACGTGGTGG 361878 >seq259 Length=588930 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607 || || ||||| || ||||| ||||| || || || |||||||| ||| || || Sbjct 399332 GTCAACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAG 399391 Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667 ||| || || | | || ||||| ||||| || ||||| ||| | || Sbjct 399392 CCTAGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCT 399451 Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 |||||||| ||| | |||||||| || |||||||| |||||| | |||| | | ||| Sbjct 399452 GATCAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGAT 399511 Query 28728 TATAACATTCAAAAAG 28743 || ||||||||||||| Sbjct 399512 TACAACATTCAAAAAG 399527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425285113024215