Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq22 109 7e-19 >seq22 Length=1334490 Score = 109 bits (120), Expect = 7e-19 Identities = 166/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 47843 CCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATA 47902 |||| ||||| ||| | ||||| |||||||| || | |||||||||||| || | | Sbjct 167076 CCTCTACATAGTCTTTTGCATGCCCCCAGTCTCGTTTGGAATCAAGATTTCCAAGCTCCA 167135 Query 47903 AACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA----TGCTCTTGTAATCTTACGAGTT 47958 |||||| ||| ||||||| ||||| || | ||| || || | ||| Sbjct 167136 GACAGTCCA--TTAAGCCCAGAGATA--TTTTAGCCACTGAACGTGTGATTTTTCTAGTA 167191 Query 47959 ACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATAC 48018 |||||| |||| || | ||| ||| |||||||||||| ||||||||| |||| ||| || Sbjct 167192 ACAAAACTTTCTCCTCTTCTAGGACTTTCATGATTAAATAGAATACCATTACAAGCAAAC 167251 Query 48019 ATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 || ||| | ||| | ||||| | |||||||| || | || ||||| ||| Sbjct 167252 ATATTGTAAGCTTCTCTGTAGTTGATAACTATCCAATAAGCGTACAGTTTGGCA 167305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665302363272200