Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq259 147 4e-30 seq207 95.1 2e-14 >seq259 Length=588930 Score = 147 bits (162), Expect = 4e-30 Identities = 144/186 (77%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || || || || | ||||| ||| |||||||||||||| ||||| || ||||| Sbjct 399520 AATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGATCAATCT 399461 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||||| || ||||||||||||||||| ||||| | || | |||| |||||| Sbjct 399460 TTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATAGT 399401 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || |||||| || || || || ||||| ||||| | ||||| ||||| || || Sbjct 399400 GTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAAAGATCTG 399341 Query 193358 CATTTT 193363 ||| || Sbjct 399340 CATGTT 399335 >seq207 Length=511460 Score = 95.1 bits (104), Expect = 2e-14 Identities = 89/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 193253 TATT-CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 |||| |||||||| ||||| || || | ||| | |||| ||||| ||| || | |||| Sbjct 363942 TATTACCTTCTTTGTCTTGAATCTTAGATTTGACATTTTCAATAGAATCTGATGGTTCAA 364001 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 |||| || || |||||||| ||||||| ||||| ||||| ||||||||||| Sbjct 364002 CTTCAAGGGTGATAGTTTTCCCTGTTAATGTTTTCACAAAAATTTGCATTTT 364053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899394793477200