Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq259 109 8e-19 seq5 98.7 1e-15 >seq259 Length=588930 Score = 109 bits (120), Expect = 8e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| | ||||| ||||| |||||||| || || | || || || | Sbjct 399335 AACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCT 399394 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || | |||| ||| || || |||||| |||||||||||||| || || || || Sbjct 399395 AGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 399454 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| || || || | |||||| |||||| | |||||||| Sbjct 399455 CAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTAC 399514 Query 156000 AATAT 156004 || || Sbjct 399515 AACAT 399519 >seq5 Length=1739417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 155810 TTTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGA 155869 ||||| | | || ||||| || || | || || | || |||||||| ||||| || || Sbjct 581855 TTTATTTCAGAAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGA 581914 Query 155870 AGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCAT 155929 ||| ||| ||| || | ||| ||| || ||| || || ||||| ||||||||||| Sbjct 581915 AGTTGAACCTTCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCAT 581974 Query 155930 ACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTT 155989 || || || ||||| | ||||| | ||| ||||| ||| | |||||| | ||| | Sbjct 581975 TCCACCCGATCAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCT 582034 Query 155990 ATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026 ||||| || || || |||||| | || || ||| Sbjct 582035 TTCAGACTACAACATTCAGAAAGAGTCCACCCTCCAT 582071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731660809186000