Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq5 132 9e-26 seq259 123 5e-23 seq93 109 1e-18 >seq5 Length=1739417 Score = 132 bits (146), Expect = 9e-26 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937 |||||| ||| || || ||||| | || ||| | || ||||| |||||||||||||| Sbjct 582059 CTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGTTTACCAGCAAA 582000 Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 || || | |||||| || ||||| || |||||||| ||||| || || ||||||||| Sbjct 581999 GATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACATT 581940 Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 ||||| || || | ||| ||||| | |||||||||||| || || | || || | Sbjct 581939 TTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGTCTTCAC 581880 Query 172058 GAATATCTGCATTTTAT--TATAAAAA 172082 ||| |||||||| || | ||||||| Sbjct 581879 GAAAATCTGCATCTTCTGAAATAAAAA 581853 >seq259 Length=588930 Score = 123 bits (136), Expect = 5e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || |||||||| | || || | | || || |||||||| || ||||| || ||||| Sbjct 399520 AATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGATCAATCT 399461 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||| |||||||| ||||||||||||||||| |||||| || ||||| ||||| Sbjct 399460 TTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATAGT 399401 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || | || || || || || |||||||| || || || ||||| | || ||||| Sbjct 399400 GTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAAAGATCTG 399341 Query 172067 CATTTT 172072 ||| || Sbjct 399340 CATGTT 399335 >seq93 Length=855823 Score = 109 bits (120), Expect = 1e-18 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| ||||||||||| || || ||||| | | |||||||| ||||| ||||| || | Sbjct 276755 CGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCT 276696 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | ||||| |||||| ||| || || || || ||||| | ||||||||| || || | Sbjct 276695 TGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGA 276636 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||||| ||||| || || || | || |||||||| || Sbjct 276635 TTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904874811693000