Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2184 107 6e-18 >seq2184 Length=81369 Score = 107 bits (118), Expect = 6e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || ||||||||||||||||| || || | | ||| |||| || || || || |||| | Sbjct 30518 CCTACAGCATCAATTTCGTCTATAAATAATATACAAGGAGCATGTTTTCGGGCCATTGAA 30577 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || | ||||| |||| |||| || || ||||||| | ||||| || || Sbjct 30578 AACATATCACGAACACGAGATGGGCCAACTCCGACGAACATTTCAAGGAATTCTGATCCG 30637 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 ||||| || || | ||||||||||||||||| ||| | ||||| | ||| || Sbjct 30638 GATACGGTTATAAAAGGAACATTTGCTTCGCCTGCAGTTGCTTTGGCCAGTAATGTTTTT 30697 Query 289210 CCTGTTCCAGGTGGTCC 289226 ||||| ||||| ||||| Sbjct 30698 CCTGTACCAGGAGGTCC 30714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471382270849645