Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1351 104 3e-17 seq418 100 4e-16 >seq1351 Length=133559 Score = 104 bits (114), Expect = 3e-17 Identities = 220/319 (69%), Gaps = 11/319 (3%) Strand=Plus/Plus Query 172526 AGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGA 172585 |||||| ||||| || | ||||| ||||||||| | ||| || ||| |||||| || Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288 Query 172586 C-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATT--AAGTCAAACTATTAATAC 172642 | ||| ||| |||||||| || ||||| | || ||| | ||| | | || || || Sbjct 104289 CATGTT-TACTGATTACACTGGTAAAGGAATAGATCAACTTCAAG--ATATCATCAACAC 104345 Query 172643 TTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATG-TACCTCAAC 172701 | ||||||| ||| | | | | || |||| | ||||||| || | | | Sbjct 104346 AATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCG-ATC 104404 Query 172702 TTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGaaaaaaaT 172761 | ||||||| ||||| ||||| ||| |||||| || || ||||| || || || Sbjct 104405 TACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGT-AGCTAATGAT 104463 Query 172762 CAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATA 172821 ||| | | ||||| |||||||||||||| |||||| | || || || || || | || Sbjct 104464 AAATTATCG--TGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTA 104521 Query 172822 ATATTGGATTTTATTCATT 172840 |||||| ||||||||| Sbjct 104522 ATATTGCTAGTTATTCATT 104540 >seq418 Length=203716 Score = 100 bits (110), Expect = 4e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 23080 TTTTTAAAAGGAAATCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCT 23139 ||||| | ||| |||| ||||||||||| |||||||| | || ||||| || || Sbjct 106645 TTTTTCAGAGGTTATCATGGAGATGGATACCCATTTGATGGACGGGGCCAAATATTGGCC 106586 Query 23140 CATGCTTTTTTCCCTGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAAT 23199 ||||| ||||| ||||| | ||| || ||||||||||| ||||||||| ||| ||| || Sbjct 106585 CATGCATTTTTTCCTGGAAGTGGGAGGGGAGGAGATGCCCATTTTGATGAAGATGAAGAT 106526 Query 23200 TGG 23202 ||| Sbjct 106525 TGG 106523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632307087219800