Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3349 178 1e-39
seq259 96.9 3e-15
seq5 86.0 5e-12
>seq3349
Length=56643
Score = 178 bits (196), Expect = 1e-39
Identities = 296/428 (69%), Gaps = 0/428 (0%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
|| |||||||||| || || || || || || || || || ||| || ||| ||
Sbjct 25649 GGAGGGTTTTTCAAGATAAAAGTATTTAGTTTGTGATTAAATTGGAGCAGACCATGAAAA 25708
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
|| |||||||| ||||| || ||| || || ||||| || || || | || |||
Sbjct 25709 CCACATGCTTTACAGCCTTGTTGAATAGTGCCTTTCTTAGCAGATACAATCAAATCTGTC 25768
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383
||||| || || || || ||||| | |||||||| | |||||| ||||| | |||||
Sbjct 25769 TCCGGATTATCGCACTCAGGACATAGGACAAACTTTCTGATGAATCCATCCAAGAGGTCT 25828
Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443
|| | || | || || || |||||||| || ||| || ||||| | ||| |
Sbjct 25829 TGCAGTTTGTTGACATCATGAGAACCGTTGACTATATATCTGTCATTTTTATGATCAAGT 25888
Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503
| || || || |||| || || || || ||||| || || || | | ||||| |||
Sbjct 25889 TTGGTCTGAGCACCCAATTCACATCCAAAATACTTGGTGGGATATGTTGGAGGACGCCCA 25948
Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563
| || ||||| | || | ||| ||||| || || || ||||| || ||||| || |||
Sbjct 25949 ATTGCTTTGGCAACCTCAGCCATATTGACAATAACTGTTTTGATACCATTGCCTTTACCT 26008
Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623
|| ||||| || | | ||||||||||| || || || || ||||| ||||| |||
Sbjct 26009 TCCACCTTAGCTTGAAGCCTAGGCATTTTGTAACGATAAAATGCATCCGCAACATTACGG 26068
Query 34624 TTAACGTT 34631
|| |||||
Sbjct 26069 TTCACGTT 26076
>seq259
Length=588930
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| ||||| || |||||||||||||| || || |||||||| ||| | || ||||||
Sbjct 399335 AACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCT 399394
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| | | | || || || ||| || |||||||| | || |||
Sbjct 399395 AGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 399454
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||||||| | || | ||| || ||||| | || |||| ||||| | | ||||||
Sbjct 399455 CAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTAC 399514
Query 110450 AACATTCAAAAAG 110462
|||||||||||||
Sbjct 399515 AACATTCAAAAAG 399527
>seq5
Length=1739417
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| ||||| || || || || || | ||||| ||||||||||| | ||| || |||
Sbjct 581865 AAGATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCT 581924
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| ||| | |||||| ||||| |||||||||||| | || |||
Sbjct 581925 TCCGACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCACCCGAT 581984
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||| | | || | ||| ||||||||| |||| |||| | || | | || |||
Sbjct 581985 CAACAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTAC 582044
Query 110450 AACATTCAAAAAGAATCTAC 110469
|||||||| ||||| || ||
Sbjct 582045 AACATTCAGAAAGAGTCCAC 582064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412725447660905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |