Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq259 152 8e-32 seq5 114 2e-20 seq207 87.8 3e-12 >seq259 Length=588930 Score = 152 bits (168), Expect = 8e-32 Identities = 147/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || ||||||||||| || || |||| || || | || || Sbjct 399339 TGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCTAGCG 399398 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || |||||| ||| ||||||||| |||||||| ||||||| Sbjct 399399 ACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAAC 399458 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || |||||||| ||||||||||| ||| ||||| | ||||||| || | Sbjct 399459 AAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTACAACA 399518 Query 146212 TACAAAAAG 146220 | ||||||| Sbjct 399519 TTCAAAAAG 399527 >seq5 Length=1739417 Score = 114 bits (126), Expect = 2e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || |||||||| |||||| | || || |||| | || Sbjct 581869 TGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCTTCCG 581928 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||||||| || || ||| ||||||||||||||||||||||||| Sbjct 581929 ACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCACCCGATCAAC 581988 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| |||||||| || || ||| | || | |||| || || | Sbjct 581989 AGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTACAACA 582048 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || ||||| || || ||||| Sbjct 582049 TTCAGAAAGAGTCCACCCTCCAT 582071 >seq207 Length=511460 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| || ||||| ||||| || |||| || || || || ||||||||||| ||| | | Sbjct 362003 AGGTATCCCACCTGATCAGCAGCGACTTATCTTCGCCGGAAAACAATTAGAAGATGACAA 361944 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| || | || ||||| || ||||||||||| || ||||||| ||||| ||||| | Sbjct 361943 AACCCTATCTGACTATAACATTCAAAAAGAATCCACACTCCATTTGGTATTGAGATTACG 361884 Query 146252 AGGAGG 146257 || || Sbjct 361883 TGGTGG 361878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785939541858200