Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq259 152 8e-32
seq5 114 2e-20
seq207 87.8 3e-12
>seq259
Length=588930
Score = 152 bits (168), Expect = 8e-32
Identities = 147/189 (78%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| || ||||||||||| || || |||| || || | || ||
Sbjct 399339 TGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCTAGCG 399398
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||| || |||||| ||| ||||||||| |||||||| |||||||
Sbjct 399399 ACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAAC 399458
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || |||||||| ||||||||||| ||| ||||| | ||||||| || |
Sbjct 399459 AAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTACAACA 399518
Query 146212 TACAAAAAG 146220
| |||||||
Sbjct 399519 TTCAAAAAG 399527
>seq5
Length=1739417
Score = 114 bits (126), Expect = 2e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || | || |||||||| |||||| | || || |||| | ||
Sbjct 581869 TGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCTTCCG 581928
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| ||||||||||| || || ||| |||||||||||||||||||||||||
Sbjct 581929 ACACTATCGAAAATGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCACCCGATCAAC 581988
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | || ||||| |||||||| || || ||| | || | |||| || || |
Sbjct 581989 AGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTACAACA 582048
Query 146212 TACAAAAAGAATCGACTATCCAT 146234
| || ||||| || || |||||
Sbjct 582049 TTCAGAAAGAGTCCACCCTCCAT 582071
>seq207
Length=511460
Score = 87.8 bits (96), Expect = 3e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191
||| || ||||| ||||| || |||| || || || || ||||||||||| ||| | |
Sbjct 362003 AGGTATCCCACCTGATCAGCAGCGACTTATCTTCGCCGGAAAACAATTAGAAGATGACAA 361944
Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251
||| || | || ||||| || ||||||||||| || ||||||| ||||| ||||| |
Sbjct 361943 AACCCTATCTGACTATAACATTCAAAAAGAATCCACACTCCATTTGGTATTGAGATTACG 361884
Query 146252 AGGAGG 146257
|| ||
Sbjct 361883 TGGTGG 361878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785939541858200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |