Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 125 9e-24
>seq1351
Length=133559
Score = 125 bits (138), Expect = 9e-24
Identities = 226/320 (71%), Gaps = 13/320 (4%)
Strand=Plus/Plus
Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612
|||||| ||||| || | ||||| ||||||||| | ||| |||||| |||||| ||
Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288
Query 180613 C-TGTGATACCAACTATATCGGGCAAGGTATAGACCAATT--AAGCCAAGTTATAGAAAC 180669
| ||| ||| | || | || |||| ||||| ||| | ||| | | || | ||
Sbjct 104289 CATGTT-TACTGATTACACTGGTAAAGGAATAGATCAACTTCAAGATA--TCATCAACAC 104345
Query 180670 TATAAAAAATAATCCCGAATGC-CGAAGAATAATCATAGATAGTTGGAATG-TATCACAA 180727
|| ||||| ||||| |||| || |||| || || | ||||||| |||| |
Sbjct 104346 AATTAAAAACAATCCA-AATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCG-AT 104403
Query 180728 TTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAA 180787
||||| | ||||| |||||||| ||||| ||||| | || || ||||| ||| |
Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463
Query 180788 ATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATAT 180847
| | ||| || ||||| |||||||||||||| ||| | || |||||||| |||| |
Sbjct 104464 A---AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTT 104520
Query 180848 AATATTGCTTTCTATTCATT 180867
||||||||| ||||||||
Sbjct 104521 AATATTGCTAGTTATTCATT 104540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655090910765000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |