Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1351 125 9e-24 >seq1351 Length=133559 Score = 125 bits (138), Expect = 9e-24 Identities = 226/320 (71%), Gaps = 13/320 (4%) Strand=Plus/Plus Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 |||||| ||||| || | ||||| ||||||||| | ||| |||||| |||||| || Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288 Query 180613 C-TGTGATACCAACTATATCGGGCAAGGTATAGACCAATT--AAGCCAAGTTATAGAAAC 180669 | ||| ||| | || | || |||| ||||| ||| | ||| | | || | || Sbjct 104289 CATGTT-TACTGATTACACTGGTAAAGGAATAGATCAACTTCAAGATA--TCATCAACAC 104345 Query 180670 TATAAAAAATAATCCCGAATGC-CGAAGAATAATCATAGATAGTTGGAATG-TATCACAA 180727 || ||||| ||||| |||| || |||| || || | ||||||| |||| | Sbjct 104346 AATTAAAAACAATCCA-AATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCG-AT 104403 Query 180728 TTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAA 180787 ||||| | ||||| |||||||| ||||| ||||| | || || ||||| ||| | Sbjct 104404 CTACCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGTAGCTAATGAT 104463 Query 180788 ATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATAT 180847 | | ||| || ||||| |||||||||||||| ||| | || |||||||| |||| | Sbjct 104464 A---AATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTT 104520 Query 180848 AATATTGCTTTCTATTCATT 180867 ||||||||| |||||||| Sbjct 104521 AATATTGCTAGTTATTCATT 104540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655090910765000