Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq93 109 5e-19 seq5 98.7 1e-15 >seq93 Length=855823 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| | | |||||| || ||||| | || ||||| ||||| |||||||| ||| Sbjct 276825 CCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAT 276766 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | ||| || | |||||| || || | ||||||||||| || ||||| || Sbjct 276765 AGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGG 276706 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| ||||| ||| | | || | ||||||| |||||||||| Sbjct 276705 ATTCCCTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACT 276646 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| || | || ||||| ||||| || || || || || |||||| Sbjct 276645 TCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATA 276598 >seq5 Length=1739417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 137273 || || ||||| || |||||||| || | || | || | ||||| | |||||||| Sbjct 582064 GTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCA-TCTTCCAACTGTTTACC 582006 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333 |||| |||||| ||| || |||||||| || |||||||||||||| || || ||| Sbjct 582005 AGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTT 581946 Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393 || | ||| | ||||| | ||||| ||||| | ||| | || || ||||| | || Sbjct 581945 TACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGT 581886 Query 137394 TTTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 581885 CTTCACGAAAATCTGCAT 581868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488403024522000