Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8572 113 4e-20 seq8065 87.8 2e-12 >seq8572 Length=13345 Score = 113 bits (124), Expect = 4e-20 Identities = 297/450 (66%), Gaps = 5/450 (1%) Strand=Plus/Minus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 || || || ||||||||||||| ||||||||||| ||| |||| | || |||||| Sbjct 8698 TATTCGACAATCTCGGCGCACAAATTGCTGCATTGAATCGTACCCAAATGTTTCTGATTG 8639 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTT 148985 ||| || || ||||||||||| || | ||||||||| || ||||| | |||| Sbjct 8638 GATTTGTAATTACAAGCGTCCTTGTAAAGGACGTACGGTCCTCCCGTTTCTATTTGCGCA 8579 Query 148986 TCCACTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGC 149045 || || ||| | ||||| | || |||| | |||| || || | Sbjct 8578 TCGACAATGGCTCTCCAGAGGTCTCGTGCATTTACTTTGCGAACGTAATTGCCGGCCGCC 8519 Query 149046 TCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCAC 149105 |||||| | ||| | || || || | | |||||| | | || || |||| Sbjct 8518 TCGTATTCTGCGTACTGGCGTTCAAATTCGTTGCCGTAT-ATGAGATGAAGCCCGGGCGA 8460 Query 149106 TTG-TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164 | | || ||||||||||| ||||| ||| | |||||||||||||| | Sbjct 8459 TCGATGTGGGCACATGAGACTCCACATTTCGTTGTTTTCGACGCGCTTCATAAATTCGTT 8400 Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCG 149224 || | |||||| ||||| | |||||||||||| | | ||||||||| | || Sbjct 8399 TGGAATCCAGAGAGCGTAGAACAGGTCGCGCGCCCGACTTTGTTCGGCGCCAGTATTTTT 8340 Query 149225 GCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGC 149284 |||| || ||| || ||||| ||||||||||| || |||||||| || | ||| Sbjct 8339 TTTAAGGTCCAGAACGTCAAAAATGTCGGCGTGCCACGGTTCGATGTACACGGCAAACGC 8280 Query 149285 GCCCTTGCGCTTG---CCGCCCTGGTCGAC 149311 |||| || ||| || || |||||||| Sbjct 8279 GCCCGGTCGTTTGTTTCCTCCTTGGTCGAC 8250 >seq8065 Length=22102 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/210 (71%), Gaps = 11/210 (5%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTC-CT--CG 133511 ||||| || ||||| || || || || ||||||||| || | | ||| ||| || | Sbjct 20183 AAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGG--ATAGGGTACG-GTCGCTAACC 20127 Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 | || || |||||| |||| || || || |||||||||||||| || || ||||| || Sbjct 20126 AAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTC-TTG 20068 Query 133572 ATCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTT 133630 | ||| || |||| | || ||||||| ||| ||||| || | ||||| |||||| Sbjct 20067 AATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGTTTT 20008 Query 133631 GCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | | ||| | |||| || |||||||| Sbjct 20007 GTCATTCA---ATGTTACAAAGATCTGCAT 19981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483281302885400