Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 116 9e-21 seq259 98.7 2e-15 >seq5 Length=1739417 Score = 116 bits (128), Expect = 9e-21 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| |||||||| || ||||||||||| ||| ||| ||||| ||||| Sbjct 581883 AAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCTTCCGACACTATCGAAAAT 581942 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301 ||||| ||||| ||||| |||||||| ||| || || |||| || || ||| Sbjct 581943 GTAAAAGCCAAGATCCAAGACAAAGAAGGCATT---CCACCCGATCAACAGCGTTTGATC 581999 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || || ||||||||||||||| | ||| | | || |||||| | ||||||||| Sbjct 582000 TTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTACAACATTCAGAAAGAG 582059 Query 206362 TCTACTCTTCACCT 206375 || || || || || Sbjct 582060 TCCACCCTCCATCT 582073 >seq259 Length=588930 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | ||||||||||| ||||| | || || || | ||| Sbjct 399341 CAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCTAGCGAC 399400 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || |||||||| |||||||||||| || || ||| Sbjct 399401 ACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAACAA 399460 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || ||||| || || ||||||||||| ||| | | ||||||||| | Sbjct 399461 AGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTACAACATT 399520 Query 206353 CAGAAAG 206359 || |||| Sbjct 399521 CAAAAAG 399527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181471245106285