Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 9e-21
seq259 98.7 2e-15
>seq5
Length=1739417
Score = 116 bits (128), Expect = 9e-21
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| |||||||| || ||||||||||| ||| ||| ||||| |||||
Sbjct 581883 AAGACCCTCACCGGAAAAACCATTACTTTGGAAGTTGAACCTTCCGACACTATCGAAAAT 581942
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301
||||| ||||| ||||| |||||||| ||| || || |||| || || |||
Sbjct 581943 GTAAAAGCCAAGATCCAAGACAAAGAAGGCATT---CCACCCGATCAACAGCGTTTGATC 581999
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| || || || ||||||||||||||| | ||| | | || |||||| | |||||||||
Sbjct 582000 TTTGCTGGTAAACAGTTGGAAGATGGACGTACTCTTTCAGACTACAACATTCAGAAAGAG 582059
Query 206362 TCTACTCTTCACCT 206375
|| || || || ||
Sbjct 582060 TCCACCCTCCATCT 582073
>seq259
Length=588930
Score = 98.7 bits (108), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| | ||||||||||| ||||| | || || || | |||
Sbjct 399341 CAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCTAGCGAC 399400
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| || ||| || |||||||| |||||||||||| || || |||
Sbjct 399401 ACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAACAA 399460
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| || ||||| || || ||||||||||| ||| | | ||||||||| |
Sbjct 399461 AGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTACAACATT 399520
Query 206353 CAGAAAG 206359
|| ||||
Sbjct 399521 CAAAAAG 399527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181471245106285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |