Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq93 138 1e-27 seq5 134 1e-26 seq8065 109 6e-19 seq259 91.5 1e-13 >seq93 Length=855823 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||||||||| ||||| |||||||| | || || |||||||||||||| ||||||||||| Sbjct 276829 CTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTC 276770 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | ||| | ||| || | ||||| || || ||||||| ||| || || ||||| Sbjct 276769 GGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGG 276710 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || || || || ||||| ||||| |||||| || | ||||| || | ||| Sbjct 276709 TGGGATTCCCTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTC 276650 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || || ||||| || || ||||| || || || || ||||| || Sbjct 276649 TACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596 >seq5 Length=1739417 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || ||||| || || |||||||||||||| || || | || || | | Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| || ||||| ||||||||||| |||||||| || ||||||||||| ||||| || Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||| || || | |||||||| | ||| || || | |||||||||||| ||| Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | || || |||||||| ||||| || Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTT 581865 >seq8065 Length=22102 Score = 109 bits (120), Expect = 6e-19 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| ||| |||||||| | || | |||||||||||||| |||||||| ||| Sbjct 20204 CCTCCTCCGAGACGCAACACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGAT 20145 Query 134547 ACGGTGTGAGAGTCGTCGAGC---TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| | |||| | | ||||| || || ||||||| ||| || || ||||| Sbjct 20144 AGGGTACG---GTCGCTAACCAAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGA 20088 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| ||||||||||| |||||| || |||||||| | |||| Sbjct 20087 GGGATTCCCTCTTTGTCTTGAATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTCC 20028 Query 134664 ACGTCGAGAGTAATGGTTTT 134683 || || || || |||||||| Sbjct 20027 ACTTCAAGGGTGATGGTTTT 20008 >seq259 Length=588930 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| |||||||| ||||| | || ||||| || || || |||||||| ||||||||| Sbjct 399483 TGTTTTCCTGCAAAGATCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATT 399424 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| || | |||||| | || || || || || |||||||| || Sbjct 399423 TTAGCCTTGACATTTTCAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCT 399364 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || |||||||| || || || ||||| ||| Sbjct 399363 GTCAAAGTTTTGACAAAGATCTGCATGTTG 399334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505252560974200