Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1351 116 3e-21 >seq1351 Length=133559 Score = 116 bits (128), Expect = 3e-21 Identities = 143/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 112160 TAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATC 112219 || ||| |||| |||||| || || |||||| || | || | |||||||| || | Sbjct 103252 TACTATTTGGATCCCAAATTTTTACACCTTTATCAGAAAGTTCCTTCGCATTTGTAGAAC 103193 Query 112220 CTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTA 112279 || | |||||||| || |||||||| ||||| |||||||| | |||||||| ||||| | Sbjct 103192 CTTTGATAAACCAAAGTAATTCTTCAACAACTCCTTTCCAAAATACTCTTTTTGTAGTGA 103133 Query 112280 GCAGTGGAAAAGAATCATGT---AGGGAGAATCTTAGTTGTGGACCAAACAAAGACAATG 112336 | | |||||| |||| | || ||||| | ||||| |||||||||||| | | Sbjct 103132 GTAATGGAAATACTTCATTTGATAGATCAAATCTCATTTGTGCACCAAACAAAGAAATAG 103073 Query 112337 TTCCTACTCCAGTTC 112351 | ||||| || |||| Sbjct 103072 TGCCTACACCTGTTC 103058 Score = 113 bits (124), Expect = 4e-20 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| ||||||||||| || || |||| ||||||||||| |||||||||||| Sbjct 104570 CCTGTGACATGTGCAATCATATAAGTCAGTAATGAATAACTAGCAATATTAAATGGCACA 104511 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 |||| |||||||| | ||||||||||||| ||||| |||| ||||| | | ||| Sbjct 104510 CCTAAACCCATATCAGCAGATCTTTGATATAATTGACACGATAATTTATCATTAGCTACA 104451 Query 111898 TAAAATTGA-CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || ||| | || | ||||||||| || | |||||| Sbjct 104450 TAGAACTGAGCTAAACA-ATGACAAGGTGGAAGTGCCAT 104413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391835326717855