Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1351 93.3 3e-14 >seq1351 Length=133559 Score = 93.3 bits (102), Expect = 3e-14 Identities = 186/270 (69%), Gaps = 7/270 (3%) Strand=Plus/Minus Query 118913 ATTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGT 118972 ||||| | | | ||| | || |||||| || ||||| | | || || || | | Sbjct 103261 ATTCTCTAGTACTATTTGGATCCCAAATTTTTACACCTTTATCAGAAAGTTCCTTCGCAT 103202 Query 118973 TTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTT 119032 |||||||||| | | ||||||||| | || |||||||| ||| ||||||| ||| ||| Sbjct 103201 TTGTAGAACCTTTGATAAACCAAAGTAATTCTTCAACAACTCCTTTCCAAAATACTCTTT 103142 Query 119033 TTGTTGTAAACAGTGGAA--ACTGACCTCTAAGTGA--ATATCTTGTTTGTGTTCCAAAA 119088 |||| || | | ||||| ||| | | | | || | |||| |||||| ||||| Sbjct 103141 TTGTAGTGAGTAATGGAAATACT-TCATTTGATAGATCAAATCTCATTTGTGCACCAAAC 103083 Query 119089 ATAGACAGAGTCCCAACACCTGTTCTATCATCTCTCTTGATACCCTGCTCTAAAATAGT- 119147 | ||| | ||| || |||||||||| || | | || | ||| | || | ||| | Sbjct 103082 AAAGAAATAGTGCCTACACCTGTTCGGTCTGATTTTTTAACACCTTCCTTAATAATTTTG 103023 Query 119148 TCTAATTAGATCAAGGTATTTTTTCTCATC 119177 ||||| ||||| ||| |||| || |||||| Sbjct 103022 TCTAA-TAGATTAAGATATTGTTCCTCATC 102994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414360187599940