Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 149 1e-30
seq93 141 2e-28
seq259 120 7e-22
seq8065 91.5 3e-13
>seq5
Length=1739417
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968
|| || || ||||||||||| || ||||| || || | ||| || | ||||||||||| |
Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014
Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028
|| || || || ||||| | || ||||| || || |||| ||||| ||||| ||||||
Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954
Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088
|| ||| || |||||||| ||||| || |||||| || | ||| || || |||||
Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894
Query 211089 GTGAGAGTCTTTACAAACACCTGCATTTTATG 211120
||||| ||||| || || | |||||| || ||
Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTTCTG 581862
>seq93
Length=855823
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || ||||| || ||||||||||| || || | ||||| | || || |||| ||
Sbjct 276801 TGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCCAATTGT 276742
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || ||||| || || ||||||||||| || || | ||| |||||||| ||||| ||
Sbjct 276741 TTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATTTTA 276682
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| ||||| ||||||||||| ||| ||| || || || ||||| || || || ||
Sbjct 276681 GCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTC 276622
Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117
| |||||| ||||| | |||||| ||
Sbjct 276621 AAAGTCTTCACAAAGATCTGCATATT 276596
>seq259
Length=588930
Score = 120 bits (132), Expect = 7e-22
Identities = 145/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984
||||||| ||||| ||||| | ||| || ||||||||||| | || || ||||| ||||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044
| | | |||||| ||||| |||| |||||| || || || || || || || ||||
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 211045 CGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTA 211101
| || ||||| ||| |||||||| || ||||| || ||||| || | ||| || |
Sbjct 399407 CAATAGTGTC---GCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGA 399351
Query 211102 CAAACACCTGCATTTT 211117
|||| | |||||| ||
Sbjct 399350 CAAAGATCTGCATGTT 399335
>seq8065
Length=22102
Score = 91.5 bits (100), Expect = 3e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|||| ||||| || ||||||||||| ||||| | ||||| | | ||| ||
Sbjct 20180 TGAATTGTGGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGGTCGCTAACCAAATGT 20121
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || ||||| || || ||||||||||| ||||| | ||| || ||||| || || ||
Sbjct 20120 TTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTCTTGAATTTTA 20061
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||| || || ||| ||||||| ||| ||| || || || ||||| || ||
Sbjct 20060 GCTTTGACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGTTTT 20008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158809150006025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |