Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq93 132 1e-25 seq5 116 9e-21 seq259 100 7e-16 seq8065 89.7 1e-12 seq22209 86.0 1e-11 >seq93 Length=855823 Score = 132 bits (146), Expect = 1e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| |||||||| ||||||| ||||| |||| | || | || || || | || Sbjct 276801 TGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCCAATTGT 276742 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || ||||| || || |||||||||||||| || || || |||||||||||||| ||| Sbjct 276741 TTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGAT-TTT 276683 Query 225631 TGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||| | | |||||||||||||||| ||| || || | ||||| || ||||| || Sbjct 276682 AGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGT 276623 Query 225690 CAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| || | || | ||||| || Sbjct 276622 CAAAGTCTTCACAAAGATCTGCATATT 276596 >seq5 Length=1739417 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || ||||| ||||| ||||| || | ||||| || | | ||| | |||||||| | | Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 || || ||||| ||||| | || ||||| ||||| ||||| ||||| |||||||||||| Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || || ||| |||||| ||||| || | ||| || || || || || || || || Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894 Query 225688 GTCAAAGTTTTTATGAACACTTGCATTTTATG 225719 || | || || | ||| | ||||| || || Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTTCTG 581862 >seq259 Length=588930 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 ||||||| | |||||||| | | |||||| |||||||||| || || || || |||| Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | || |||||| || || ||||| ||||| || ||||| || || ||| ||| || Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 | || ||||| | || || || | ||||| || || || ||||||||||| | | Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 225704 ACACTTGCATTTT 225716 | | ||||| || Sbjct 399347 AGATCTGCATGTT 399335 >seq8065 Length=22102 Score = 89.7 bits (98), Expect = 1e-12 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 |||||||| ||||||| |||||||||| | || | | | | || || || Sbjct 20174 GTGGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGGTCGCTAACCAAATGTTTTCCC 20115 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 ||||| || || |||||||||||||| || || || || |||||||| || ||| || || Sbjct 20114 GCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTCTTGAAT-TTTAGCTTT 20056 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| ||||||| |||| |||||| || | ||||| || ||| | |||| || Sbjct 20055 GACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGTTTTGTCATTCAATGT 19996 Query 225696 T 225696 | Sbjct 19995 T 19995 >seq22209 Length=1242 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 7630 TTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTT 7689 |||||||||||||| || | |||||| ||||| |||| ||||| ||||| || |||| Sbjct 748 TTCGGAAATTGATTAGTACTTTTAATAATTGGATCTCCAGATATAGCTTTCCCCCGGCTA 807 Query 7690 AACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728 |||||| |||| || ||||||||| ||||| ||||| Sbjct 808 AACAATCTAAGATTCTGATTACTAATTCCTTC--TATTT 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192178477220990