Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq86 187 3e-42 >seq86 Length=611229 Score = 187 bits (206), Expect = 3e-42 Identities = 233/317 (74%), Gaps = 2/317 (1%) Strand=Plus/Plus Query 77026 TATTTTGAATGGAACCACCATCTGATAT-AATTGTATTCTTTATATCATCATTCCACAAT 77084 ||| ||||| ||||||| || | || ||||| || ||| || | |||| ||| | | Sbjct 223769 TATCTTGAACGGAACCATTATTTACAATCAATTG-ATCCTTCATGTTGTCATCCCATAGT 223827 Query 77085 TTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAAT 77144 | || ||| |||| | |||||| ||||||| | |||||||||||| ||||| Sbjct 223828 CCCAATTCAACCAAATCTCTCAACAGATGATGATTAACAACTTGAAATTCTCCCGACAAA 223887 Query 77145 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATT 77204 ||||| |||| ||||||||| ||||||||||| | |||||||||||||| |||||| Sbjct 223888 ACTCTTCGAGAGTAAATATTTGATGTATATGGTTCAAATGATTCATTGTTTCCTAAAATT 223947 Query 77205 TGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT 77264 || || || |||||||||||||||||||||| | | | ||| | | || ||| Sbjct 223948 TGTGCTGTGGAAGCAGTTGGCATAGGTGCCATAAGAAGAGAATTACGAACGCCGTGTTGA 224007 Query 77265 CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGA 77324 |||||||| ||||||| | ||||||||| ||||||| || ||||| ||| | | Sbjct 224008 CTGATTTTTTCTTTTAATGCTGCCCAATCCCAGAGATCTGTTGGGGTAACATTCCACATA 224067 Query 77325 TCGTATTGTAGAATTCC 77341 || |||||||| || || Sbjct 224068 TCATATTGTAGGATACC 224084 Score = 150 bits (166), Expect = 2e-31 Identities = 143/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT 78469 |||||| || ||||| ||||| || || |||||||||| |||| ||| ||||||||||| Sbjct 234750 AAATAACGTTGGAGAAGCATGGGTGAAATATTTTTCAGAGAGTAAATTATATGTTTCAAT 234809 Query 78470 AGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 |||||| ||||| || ||| ||||| || | ||| |||||||||||||| ||||| Sbjct 234810 AGCTGAGTCTATATCTTCGCCATGGATTCCAACGGATACTCGCATCAACATATGTTGAGG 234869 Query 78530 TCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 78589 |||||| || ||| ||| ||||||| || || ||| |||||||||| | |||| | Sbjct 234870 TCTTTCGACAACTTTACCATTGATTTTCATTAAATAAGATCTTTCCAAAGTCTAAAAAAC 234929 Query 78590 AAA 78592 ||| Sbjct 234930 AAA 234932 Score = 132 bits (146), Expect = 7e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| || ||||| ||| |||||| || ||| || || |||||||| | Sbjct 232756 TCAAATTCGTCACCCCAGCAATCGCTCAATCCTGGACATCTGTTCGGACACATCAAACTC 232815 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || |||||| | |||||| ||||||| ||| |||||||| |||||| |||| Sbjct 232816 CAAGTTCCATCTGATTCTACTCGTCTCATAAATTCATCGGGTATCCAAAGAGCATAAAAT 232875 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | |||||| | |||| ||||| ||||| ||||||||||| | ||| | ||| || | | Sbjct 232876 AAATCTCGAGCTCTAAACTCTTCTTTTCCCGTATTCTTTTTTAAATCTAAAAATTCAAAA 232935 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTC 78150 ||||| |||||||||||| | ||| || || | | |||| |||| Sbjct 232936 ATATCTCCATGCCATGGTTCCAAATAAATAGCAAAAGCTCCGGGTC 232981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694468344634400