Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq86 194 2e-44 >seq86 Length=611229 Score = 194 bits (214), Expect = 2e-44 Identities = 190/245 (78%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751 ||| |||| | |||||| ||||||||| |||||||||||| ||||| |||||||||| | Sbjct 223840 AAATCTCTCAACAGATGATGATTAACAACTTGAAATTCTCCCGACAAAACTCTTCGAGAG 223899 Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811 |||||||| ||||||||||| | |||||||||||||| |||||||| || || ||| Sbjct 223900 TAAATATTTGATGTATATGGTTCAAATGATTCATTGTTTCCTAAAATTTGTGCTGTGGAA 223959 Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871 ||||| ||||||||||||| | | | ||| | | || ||| |||||||| ||| Sbjct 223960 GCAGTTGGCATAGGTGCCATAAGAAGAGAATTACGAACGCCGTGTTGACTGATTTTTTCT 224019 Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931 |||| | ||||||||| ||||||| ||| ||||| ||| | ||| |||||||| Sbjct 224020 TTTAATGCTGCCCAATCCCAGAGATCTGTTGGGGTAACATTCCACATATCATATTGTAGG 224079 Query 75932 ATTCC 75936 || || Sbjct 224080 ATACC 224084 Score = 141 bits (156), Expect = 1e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 77005 AAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT 77064 ||| || || ||||| ||||| ||||| |||||||||| |||| ||| ||||||||||| Sbjct 234750 AAATAACGTTGGAGAAGCATGGGTGAAATATTTTTCAGAGAGTAAATTATATGTTTCAAT 234809 Query 77065 AACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124 | ||| |||||||| ||| ||||| || | || |||||||||||||| ||||| Sbjct 234810 AGCTGAGTCTATATCTTCGCCATGGATTCCAACGGATACTCGCATCAACATATGTTGAGG 234869 Query 77125 TCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 77184 || ||| ||| ||| ||| ||||||| || || ||| |||||||||| | |||| | Sbjct 234870 TCTTTCGACAACTTTACCATTGATTTTCATTAAATAAGATCTTTCCAAAGTCTAAAAAAC 234929 Query 77185 AAA 77187 ||| Sbjct 234930 AAA 234932 Score = 132 bits (146), Expect = 7e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || ||||| ||| ||| || |||||| |||||||||||||| | Sbjct 232756 TCAAATTCGTCACCCCAGCAATCGCTCAATCCTGGACATCTGTTCGGACACATCAAACTC 232815 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || |||||| | || ||| ||||||| ||| |||||||| |||||| |||| Sbjct 232816 CAAGTTCCATCTGATTCTACTCGTCTCATAAATTCATCGGGTATCCAAAGAGCATAAAAT 232875 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | |||||| | |||| ||||| ||||| ||||||||||| | ||||| || || | | Sbjct 232876 AAATCTCGAGCTCTAAACTCTTCTTTTCCCGTATTCTTTTTTAAATCTAAAAATTCAAAA 232935 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 ||||| |||||||||||| | ||| || || | | | || |||| Sbjct 232936 ATATCTCCATGCCATGGTTCCAAATAAATAGCAAAAGCTCCGGGTC 232981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712728673867200