Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq86 194 2e-44
>seq86
Length=611229
Score = 194 bits (214), Expect = 2e-44
Identities = 190/245 (78%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751
||| |||| | |||||| ||||||||| |||||||||||| ||||| |||||||||| |
Sbjct 223840 AAATCTCTCAACAGATGATGATTAACAACTTGAAATTCTCCCGACAAAACTCTTCGAGAG 223899
Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811
|||||||| ||||||||||| | |||||||||||||| |||||||| || || |||
Sbjct 223900 TAAATATTTGATGTATATGGTTCAAATGATTCATTGTTTCCTAAAATTTGTGCTGTGGAA 223959
Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871
||||| ||||||||||||| | | | ||| | | || ||| |||||||| |||
Sbjct 223960 GCAGTTGGCATAGGTGCCATAAGAAGAGAATTACGAACGCCGTGTTGACTGATTTTTTCT 224019
Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931
|||| | ||||||||| ||||||| ||| ||||| ||| | ||| ||||||||
Sbjct 224020 TTTAATGCTGCCCAATCCCAGAGATCTGTTGGGGTAACATTCCACATATCATATTGTAGG 224079
Query 75932 ATTCC 75936
|| ||
Sbjct 224080 ATACC 224084
Score = 141 bits (156), Expect = 1e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 77005 AAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT 77064
||| || || ||||| ||||| ||||| |||||||||| |||| ||| |||||||||||
Sbjct 234750 AAATAACGTTGGAGAAGCATGGGTGAAATATTTTTCAGAGAGTAAATTATATGTTTCAAT 234809
Query 77065 AACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124
| ||| |||||||| ||| ||||| || | || |||||||||||||| |||||
Sbjct 234810 AGCTGAGTCTATATCTTCGCCATGGATTCCAACGGATACTCGCATCAACATATGTTGAGG 234869
Query 77125 TCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 77184
|| ||| ||| ||| ||| ||||||| || || ||| |||||||||| | |||| |
Sbjct 234870 TCTTTCGACAACTTTACCATTGATTTTCATTAAATAAGATCTTTCCAAAGTCTAAAAAAC 234929
Query 77185 AAA 77187
|||
Sbjct 234930 AAA 234932
Score = 132 bits (146), Expect = 7e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|||||||| || ||||| ||| ||| || |||||| |||||||||||||| |
Sbjct 232756 TCAAATTCGTCACCCCAGCAATCGCTCAATCCTGGACATCTGTTCGGACACATCAAACTC 232815
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| |||||| | || ||| ||||||| ||| |||||||| |||||| ||||
Sbjct 232816 CAAGTTCCATCTGATTCTACTCGTCTCATAAATTCATCGGGTATCCAAAGAGCATAAAAT 232875
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
| |||||| | |||| ||||| ||||| ||||||||||| | ||||| || || | |
Sbjct 232876 AAATCTCGAGCTCTAAACTCTTCTTTTCCCGTATTCTTTTTTAAATCTAAAAATTCAAAA 232935
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745
||||| |||||||||||| | ||| || || | | | || ||||
Sbjct 232936 ATATCTCCATGCCATGGTTCCAAATAAATAGCAAAAGCTCCGGGTC 232981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712728673867200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |