Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq93 131 4e-25
seq5 102 2e-16
seq259 100 7e-16
>seq93
Length=855823
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | | || | ||| || || || || |||||||||||||| |||| || ||
Sbjct 276820 CCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGT 276761
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || || || | ||| |||||||| || || | || ||||| | | ||||||
Sbjct 276760 ACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCC 276701
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| ||||| ||||| |||||| |||| | | ||||||| |||||||||||
Sbjct 276700 CTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAG 276641
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || |||||||| || | ||||||||| |||| |||||| ||
Sbjct 276640 GGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596
>seq5
Length=1739417
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958
||||| || || |||||||| || |||||||| || | | ||| | |||||||| |
Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
||| || || ||||| | | ||| || || | | || ||||| || ||||| ||
Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| ||| ||| | || | |||| ||| || ||||| | |||||| ||||| ||
Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894
Query 152079 GTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| ||||||||||| | |||||| ||
Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTT 581865
>seq259
Length=588930
Score = 100 bits (110), Expect = 7e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974
||||||| ||||||||||| | | |||||| |||||||||| ||| || || ||||
Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| | || || || || | | |||||||| || ||||||||||| |||||| | |
Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | |||| | ||| || ||||| || || ||||| || || | ||| || || |
Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348
Query 152095 AGACCTGCATTTT 152107
||| |||||| ||
Sbjct 399347 AGATCTGCATGTT 399335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153479526850035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |