Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq259 96.9 3e-15
seq93 86.0 5e-12
>seq259
Length=588930
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
|| ||||| || ||||||||||| ||||| || |||||||| ||| | || || ||
Sbjct 399335 AACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCT 399394
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
||||| || ||| | || || |||||| || |||||||| |||| |||
Sbjct 399395 AGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 399454
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|||||||| | || | ||| || |||||||| |||||| | |||| | | |||||
Sbjct 399455 CAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTAC 399514
Query 111277 AATATACAAAAAG 111289
|| || |||||||
Sbjct 399515 AACATTCAAAAAG 399527
>seq93
Length=855823
Score = 86.0 bits (94), Expect = 5e-12
Identities = 166/243 (68%), Gaps = 4/243 (2%)
Strand=Plus/Plus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||| ||||| || ||||| || || ||||| |||||||| || ||| | ||| |||||
Sbjct 276595 AAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAACC 276654
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
| || | | | | || ||| ||||| ||||| || || | || |||
Sbjct 276655 CTCAGACACCATCGAGAACGTCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCCGA 276714
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111273
|||||| | || |||| || || ||||||||||| || | | |||| ||||
Sbjct 276715 CCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTAT--CCGAC 276772
Query 111274 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111333
|| || || ||||| ||||| || || ||||| ||||||||||| | || || || ||
Sbjct 276773 TACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGGAAAGCAA 276832
Query 111334 TAA 111336
|||
Sbjct 276833 TAA 276835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421692524077960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |