Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq259 96.9 3e-15 seq93 86.0 5e-12 >seq259 Length=588930 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 || ||||| || ||||||||||| ||||| || |||||||| ||| | || || || Sbjct 399335 AACATGCAGATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAGGTTGAGCCT 399394 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 ||||| || ||| | || || |||||| || |||||||| |||| ||| Sbjct 399395 AGCGACACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGAT 399454 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||||| | || | ||| || |||||||| |||||| | |||| | | ||||| Sbjct 399455 CAACAAAGATTGATCTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTAC 399514 Query 111277 AATATACAAAAAG 111289 || || ||||||| Sbjct 399515 AACATTCAAAAAG 399527 >seq93 Length=855823 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155 ||| ||||| || ||||| || || ||||| |||||||| || ||| | ||| ||||| Sbjct 276595 AAATATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACCCTTGAAGTAGAACC 276654 Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215 | || | | | | || ||| ||||| ||||| || || | || ||| Sbjct 276655 CTCAGACACCATCGAGAACGTCAAAGCTAAAATCCAAGACAAGGAGGGAATCCCACCCGA 276714 Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111273 |||||| | || |||| || || ||||||||||| || | | |||| |||| Sbjct 276715 CCAACAACGTCTGATTTTCGCCGGAAAACAATTGGAGGACGGCCGTACCCTAT--CCGAC 276772 Query 111274 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111333 || || || ||||| ||||| || || ||||| ||||||||||| | || || || || Sbjct 276773 TACAACATCCAAAAGGAATCCACCCTCCATTTGGTGTTGCGTCTCAGGGGAGGAAAGCAA 276832 Query 111334 TAA 111336 ||| Sbjct 276833 TAA 276835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421692524077960