Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq93 179 8e-40 seq5 163 6e-35 seq259 127 4e-24 seq8065 100 6e-16 seq2541 86.0 1e-11 seq2420 86.0 1e-11 seq772 86.0 1e-11 seq305 86.0 1e-11 seq53 86.0 1e-11 seq45 86.0 1e-11 seq25 86.0 1e-11 seq4 86.0 1e-11 >seq93 Length=855823 Score = 179 bits (198), Expect = 8e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| | ||| ||| ||||||||||||||||| | || || ||||| ||||| Sbjct 276807 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGATAGGGTACGGCCGTCCTCC 276748 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| ||||| || |||| |||||||||||| || || ||||||||||||||| Sbjct 276747 AATTGTTTTCCGGCGAAAATCAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGG 276688 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| ||| | ||||| ||||| || | ||| ||||| || ||||| || || Sbjct 276687 ATTTTAGCTTTGACGTTCTCGATGGTGTCTGAGGGTTCTACTTCAAGGGTGATTGTTTTG 276628 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||||||||| || || |||||||| || Sbjct 276627 CCAGTCAAAGTCTTCACAAAGATCTGCATATT 276596 >seq5 Length=1739417 Score = 163 bits (180), Expect = 6e-35 Identities = 153/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| || ||||||||||| | ||| || || ||||| || | ||||| || |||||| Sbjct 582058 TCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAACTGTTTACCAGCAAAG 581999 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| ||||| || ||||| || || |||||||||||||| |||||||| | Sbjct 581998 ATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACATTT 581939 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| |||| ||| ||||| | ||| || || || || || | ||||| ||| Sbjct 581938 TCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCGGTGAGGGTCTTCACG 581879 Query 283089 AATATCTGCATTTTC 283103 || |||||||| ||| Sbjct 581878 AAAATCTGCATCTTC 581864 >seq259 Length=588930 Score = 127 bits (140), Expect = 4e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 ||||||| |||||||| || | ||| || | ||||| |||| |||||| || ||||||| Sbjct 399527 CTTTTTGAATGTTGTAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAGA 399468 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||| | |||||| ||| ||||| || || || ||||| || || || || || | | Sbjct 399467 TCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCCTTGACATTTT 399408 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | |||||||| || || || || || ||||| || || || |||||||| || || | Sbjct 399407 CAATAGTGTCGCTAGGCTCAACCTCAAGGGTGATGGTTTTTCCTGTCAAAGTTTTGACAA 399348 Query 283090 ATATCTGCATTTT 283102 | |||||||| || Sbjct 399347 AGATCTGCATGTT 399335 >seq8065 Length=22102 Score = 100 bits (110), Expect = 6e-16 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| | ||| ||| |||||||||||||| || | || || ||| | | Sbjct 20186 ACCAAATGAATTGTGGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGGTCGCTAACC 20127 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||||| || || || |||| |||||||||||| || || ||||| |||||||| Sbjct 20126 AAATGTTTTCCCGCGAAAATCAGACGTTGTTGGTCGGGAGGGATTCCCTCTTTGTCTTGA 20067 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| || ||||| | ||||| || | ||| ||||| || ||||| || || Sbjct 20066 ATTTTAGCTTTGACATTATCGGTGGTGTCGGAGGGTTCCACTTCAAGGGTGATGGTTTTG 20007 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | |||| | | || || |||||||| Sbjct 20006 TCATTCAATG---TTACAAAGATCTGCAT 19981 >seq2541 Length=72813 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 64492 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64436 >seq2420 Length=127154 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 8385 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 8329 >seq772 Length=154466 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 148393 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 148449 >seq305 Length=510274 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 380563 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 380619 >seq53 Length=807806 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 122415 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 122471 >seq45 Length=1118719 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 183700 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 183644 >seq25 Length=1185957 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 780407 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 780463 >seq4 Length=1754129 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 601271 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 601215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046429599077590