Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 seq93 98.7 7e-16 >seq5 Length=1739417 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || || ||| ||| || || |||||||| || | || || | || |||| | Sbjct 582073 AGATGGAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTACGTCCATCTTCCAAC 582014 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 || || || ||||||||||||||||| ||||| | || | ||||| || || ||| Sbjct 582013 TGTTTACCAGCAAAGATCAAACGCTGTTGATCGGGTGGAATGCCTTCTTTGTCTTGGATC 581954 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || || | || | || ||||||| | ||| || |||| ||||| || ||||| Sbjct 581953 TTGGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTTCCG 581894 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGAAAA 44351 ||||||||||||||||| || ||||| | |||| |||| Sbjct 581893 GTGAGGGTCTTCACGAAAATCTGCATCTTCTGAAATAAAA 581854 >seq93 Length=855823 Score = 98.7 bits (108), Expect = 7e-16 Identities = 166/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| | |||| || || || | |||||||| || || ||| |||||||||||||| Sbjct 276835 TTATTGCTTTCCTCCCCTGAGACGCAACACCAAATGGAGGGTGGATTCCTTTTGGATGTT 276776 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || || |||| |||| || || ||||| || |||| ||| || || Sbjct 276775 GTAGTCGGATAGGGTACGGCCGTCCTCCAATTGTTTTCCGGCGAAAATCAGACGTTGTTG 276716 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 || | || | || ||||| || || || |||| | |||| | |||||||| | Sbjct 276715 GTCGGGTGGGATTCCCTCCTTGTCTTGGAT-TTTAGCTTTGACGTTCTCGATGGTGTCTG 276657 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||| || || | || || || || || || | |||||||| ||||| ||||| Sbjct 276656 AGGGTTCTACTTCAAGGGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 276599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359889117263445