Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27]
23,085 sequences; 701,763,251 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq192 109 7e-19
seq1351 105 9e-18
>seq192
Length=450475
Score = 109 bits (120), Expect = 7e-19
Identities = 135/180 (75%), Gaps = 10/180 (6%)
Strand=Plus/Plus
Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223
|||||||||||| ||||| ||||| |||||||| |||||||||| ||| | || ||||||
Sbjct 388051 AAACAATCGTCTCACGTTTGCTTCTGATTCACCAACATATTTGTCTAAAATTTGAGGACC 388110
Query 156224 GTTAACTATTTTGACGGGTCGTG---ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280
|| |||||||| || ||| | |||||| | |||| | || |||||||||||
Sbjct 388111 ATTCACTATTTT--TGGTTCGCGTGCATTTAACA-TTTGACCAATTTGTCGAGCCATTAA 388167
Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATA--ACAATACTCCTTTTATATGTTTACAACCT 156338
|||||||| ||||| || || || | | |||| ||||| | |||||||| |||
Sbjct 388168 AGTTTTACCCGTACCAGGGGGACCATACAGTAGAATA--CCTTTGACGTGTTTACAGCCT 388225
>seq1351
Length=133559
Score = 105 bits (116), Expect = 9e-18
Identities = 229/338 (68%), Gaps = 10/338 (3%)
Strand=Plus/Plus
Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC-GCGT-TACATA 50531
||| || ||||| || || || |||||||||||| | |||| ||||| | | || | |
Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288
Query 50532 AATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACG 50591
|| || | |||| ||| |||| | |||||||| ||| | || || | ||
Sbjct 104289 CATGTTTACTGA--TTACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAACACA 104346
Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651
| |||| || || | ||||| || || ||||| || |||||||| | |||| ||
Sbjct 104347 ATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGATCTA 104406
Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT 50711
||| | | || || |||||| |||| ||| || |||| || |||| |
Sbjct 104407 CCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGT---AGCTAATGAT 104463
Query 50712 ---TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAAC 50768
||||| ||||||| ||||||||||| ||||||||||||||||| || || || ||
Sbjct 104464 AAATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAAT 104523
Query 50769 GTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806
| ||| ||| | ||| | || ||| |||| || ||
Sbjct 104524 ATTGCTAGTTATTCATTACTGACTTATATGATTGCACA 104561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666882707112600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |