Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pachypsylla_20venusta_20[genbank_20GCA_5F000695645.1_202014-05-27] 23,085 sequences; 701,763,251 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq192 109 7e-19 seq1351 105 9e-18 >seq192 Length=450475 Score = 109 bits (120), Expect = 7e-19 Identities = 135/180 (75%), Gaps = 10/180 (6%) Strand=Plus/Plus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 |||||||||||| ||||| ||||| |||||||| |||||||||| ||| | || |||||| Sbjct 388051 AAACAATCGTCTCACGTTTGCTTCTGATTCACCAACATATTTGTCTAAAATTTGAGGACC 388110 Query 156224 GTTAACTATTTTGACGGGTCGTG---ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280 || |||||||| || ||| | |||||| | |||| | || ||||||||||| Sbjct 388111 ATTCACTATTTT--TGGTTCGCGTGCATTTAACA-TTTGACCAATTTGTCGAGCCATTAA 388167 Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATA--ACAATACTCCTTTTATATGTTTACAACCT 156338 |||||||| ||||| || || || | | |||| ||||| | |||||||| ||| Sbjct 388168 AGTTTTACCCGTACCAGGGGGACCATACAGTAGAATA--CCTTTGACGTGTTTACAGCCT 388225 >seq1351 Length=133559 Score = 105 bits (116), Expect = 9e-18 Identities = 229/338 (68%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC-GCGT-TACATA 50531 ||| || ||||| || || || |||||||||||| | |||| ||||| | | || | | Sbjct 104229 AGGTGACTTAGGTCCCGTATATGGTTTTCAATGGCGTCATTACGGAGCTGAATATAAAGA 104288 Query 50532 AATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACG 50591 || || | |||| ||| |||| | |||||||| ||| | || || | || Sbjct 104289 CATGTTTACTGA--TTACACTGGTAAAGGAATAGATCAACTTCAAGATATCATCAACACA 104346 Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651 | |||| || || | ||||| || || ||||| || |||||||| | |||| || Sbjct 104347 ATTAAAAACAATCCAAATGATCGTCGAATCATAATGTGTGCTTGGAATCCTATCGATCTA 104406 Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT 50711 ||| | | || || |||||| |||| ||| || |||| || |||| | Sbjct 104407 CCAAAAATGGCACTTCCACCTTGTCATTGTTTAGCTCAGTTCTATGT---AGCTAATGAT 104463 Query 50712 ---TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAAC 50768 ||||| ||||||| ||||||||||| ||||||||||||||||| || || || || Sbjct 104464 AAATTATCGTGTCAATTATATCAAAGATCTGCTGATATGGGTTTAGGTGTGCCATTTAAT 104523 Query 50769 GTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 | ||| ||| | ||| | || ||| |||| || || Sbjct 104524 ATTGCTAGTTATTCATTACTGACTTATATGATTGCACA 104561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666882707112600