Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq28771 84.2 2e-11 >seq28771 Length=922144 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 ||| || ||||| ||||| || || || || ||||| ||||||||||| |||||||| Sbjct 289694 ATGTGCAATCATGTGTGTTAAAAGTGAGTAACTGGCAATATTAAAAGGCACACCTAGTCC 289635 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||| || |||||||| | | || || | | |||||| ||||| |||||| Sbjct 289634 CATATCCGCGCTCCTTTGATACATCAAGCATGACAATTCTCCATCTGCCACATGAAACTG 289575 Query 97242 ACTCAATAC-ATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCAC 97300 | || || ||| || || || | |||||| || |||| | |||||| |||| Sbjct 289574 GAT-AAGACAATGGCATGGTGGTAGTGCCATTAGACCAAGATCTGATGGATTCCATGCAC 289516 Query 97301 ACATCAACATTCTTCTATCGGTTGGGTT 97328 | || | ||| || || || | ||| || Sbjct 289515 ATATTATCATCCTCCTGTCAGCTGGATT 289488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346528427777900