Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq28771 95.1 1e-14 >seq28771 Length=922144 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20353 GACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCT 20412 ||||| || || || |||| || ||||| | |||| | | ||||||| | || Sbjct 289497 GACAGGAGGATGATAATATGTGCATGGAATCCATCAGATCTTGGTCTAATGGCACTACCA 289556 Query 20413 CCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTAT 20472 ||||| ||| || ||| ||| | || || || |||||||| || |||||| Sbjct 289557 CCATGCCATTGTCTTATCCAGTTTCATGTGGCAGATGGAGAATTGTCATGCTTGATGTAT 289616 Query 20473 CAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTT 20532 ||| | ||| ||||||||||| ||||| ||||| |||||||| ||||| | || | Sbjct 289617 CAAAGGAGCGCGGATATGGGACTAGGTGTGCCTTTTAATATTGCCAGTTACTCACTTTTA 289676 Query 20533 ACGTATATGATTGCACATGTTACAGATTTAAA 20564 || | |||||||||||| | |||| ||||| Sbjct 289677 ACACACATGATTGCACATATAACAGGATTAAA 289708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398889810124150