Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq55175 224 8e-54 seq27267 89.7 4e-13 >seq55175 Length=171662 Score = 224 bits (248), Expect = 8e-54 Identities = 871/1352 (64%), Gaps = 29/1352 (2%) Strand=Plus/Minus Query 35665 GCCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAATAA 35724 ||| || | ||||||||| | || ||||| ||||| |||||||| ||||| ||||||| Sbjct 40271 GCCCATGTTCATAGCGTTTAACAGTTCGCCATTGTCTGCATCGATCTCCCACGCGAATAG 40212 Query 35725 TCCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTGTC 35784 ||||| ||| || | ||| || | |||||| | | ||||| |||| Sbjct 40211 ACCGCCCAGTTTATTGTTTCTCACATACTTGCCTTTCTCAATAGTCGATCGCGGATTGTC 40152 Query 35785 ATACGATATTAAGTCGCCAGAGGCGCGGTCGAATACGTACGCAGCCTTGGCCACGTCGTC 35844 |||| ||||| ||| || | | | ||| || || | || | || |||| ||| Sbjct 40151 GTACGTTATTAGGTCACCGGTCGATGGCCTGAACACATATGGGGCTTCTGCAACGTTGTC 40092 Query 35845 G-AATG-----CGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGACCAC 35898 | |||| | ||| | | ||| | || || || | ||||| || || || Sbjct 40091 GTAATGGAACTCCCATTTGCCCATAGCAATTTCATTTGCTATTTCCCTGTAATCAACAAC 40032 Query 35899 GCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGTCACT 35958 || | | ||||||||| | | ||||| ||| |||| |||||||||||| || Sbjct 40031 ACCATCCTGCCATGTACCTTTTACTGGTCCTGTGGCGTTGCCAGTGAATGGATTGTTACC 39972 Query 35959 GTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGAGttt 36018 | || ||| || || ||||| ||||| |||||||| ||||| || | ||| | || Sbjct 39971 TTCATAACCGTGTACACCAGTCCAGCCGCGTCCGTACATAGCTACACCTACCACAATCTT 39912 Query 36019 ttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTACGGTTC 36078 || || ||||| | ||| || || ||| | || | | | | ||| || | ||| Sbjct 39911 CTTAGGGTTCACACCTTGAGCAAGTAAATATTTAACACCAAAATCAGTGGTATAAGTTTC 39852 Query 36079 GTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATTAGACCA 36138 || || ||||| || | | || || | |||||||||||||| | || ||||| Sbjct 39851 TTTGGGATTCCATGCAGGGGCATATAGGGGAGTCTGATGACCGAGGGTGTCGTTGGACCA 39792 Query 36139 AGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCTCGGTC 36198 || |||||||| || |||||||| | ||| || | || | ||||| ||| ||| | Sbjct 39791 GGCACCTTTGAAGTCGTAACTCATGAGGAAGATGTGGTCCATATACTTTTGGGCTTCGCT 39732 Query 36199 GTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCTAAAGT 36258 ||||| || | ||||| || ||||| ||||| |||| |||||| || | | Sbjct 39731 GTAATCTACGACTTGAATCTTATCCCATCCAGCACTAATAGCTGAGGTGAGCTCGTATTT 39672 Query 36259 ACGATTCGTTTGTATTTGAA--CTTGATCGAGCATGGCGCGCAATTCGCCCAATAAAGCG 36316 | ||||| | | ||| || | | | ||| ||||||| || || || | Sbjct 39671 CTTACCCGTTTCT-TCGGAAAGCTCGTTTAA-CATTTCGCGCAACTCCTTCATTAGTTCA 39614 Query 36317 ATATA--CGTGTTATTGTCGCGTTCCACATCGCCAACGTTTGGATTGGCGCCTTTGCCGC 36374 | ||| | | | | | || | || ||| || || || || || || |||| Sbjct 39613 ACATAAACTTCTCCATCTTTCGGGCTAC-----CAAGGTCGGGGTTAGCTCCCTTACCGC 39559 Query 36375 CCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAAATTCAC 36434 | || ||||||||||| || || | || ||||| || ||||| || | || || Sbjct 39558 CAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTCCAGGTTTGAAGGAAATCTT 39499 Query 36435 GCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA-TC-GTGCATATGATAGAAGGGATC 36492 ||| || || || || | ||| ||| | || ||| | | || |||| ||||| Sbjct 39498 TCACAGAATCAACGAAGCGGTCCCGC-TTCACTTTGTCAGTGAAAAAGA-AGAAAGGATC 39441 Query 36493 GGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTGGGATTGGCCAATTTTGC 36552 | || ||||| || || || || | | | ||| || | || | || ||| Sbjct 39440 AGCAAGAGTCCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCCGGCCTAGCTTGTTTAAG 39381 Query 36553 TGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAACGCCTGTTTG 36612 | ||| | |||||||||||||||||||| ||||| ||||| | | ||| | || Sbjct 39380 GGACATCAGCTGACCAAAATTGCCTTTGTAAGGTTCATTCCAAGAAGACAAGCCCTTCTG 39321 Query 36613 TGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGTCCCTGCCAGC 36672 ||| ||||| || || ||||| |||||||| |||||||| || |||| || | |||| Sbjct 39320 TGGCTTTTGAAGAGCAGCCCAAGGATCGTGAATGGAAACCTTGAAATCTTCACGGCCACT 39261 Query 36673 GCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGTCGTTTATACC 36732 ||| || | || | |||| |||||| || ||| ||||||||||| || || || Sbjct 39260 GCATGAACGCTGAAGAGCTTGAAAACTGCCTTCGATTTCCTTTAAACTGTCATTGATGCC 39201 Query 36733 GTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCGGCGTGGGCAC 36792 || || || ||||| || ||||| || || |||| || | || || || | || | Sbjct 39200 ATCGCCTCCACAAATTGGAATAAAACCATACAAAAGATGAGTCAGATTAGGAATTGGTAT 39141 Query 36793 TTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGGCCGCTAC-GG 36851 || || || || ||| |||||| |||||||| || || || || | || Sbjct 39140 ACGATCGACTGGGAATTTTCGTGGGTAAACACCCCATTCCACGAAGTAAGCTCCAACAAC 39081 Query 36852 TGTGATCAGTGT-TGTACGTATACGGTTTATTGTTTTCTTGCCACGTGTAT--TGTAACG 36908 | || | || ||| || | || |||| |||||| ||| | |||| ||| | Sbjct 39080 TTTGCCCGAAGTCTGT--TTAAATGGCTTAT--TTTTCTCTCCAAGGGTATACATTAATG 39025 Query 36909 GTTTTAAATGTTTACCATCGGTGTCTGCGATCACGACTTCTACGGTTTGACTAGCCGAAC 36968 | || ||| | || ||||| || || | |||| ||| | | ||| | ||| | Sbjct 39024 GAGGTAGATGACTGCCGTCGGTATCAGCTACGACGATTTCAGTGAGCTCACTCGTCGAGC 38965 Query 36969 AGCCGTCGGCATTGCACAGTTTTACATACATC 37000 | ||||| ||||||||||||| || | |||| Sbjct 38964 ATCCGTCAGCATTGCACAGTTCAACCTGCATC 38933 >seq27267 Length=86652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 100604 CACGGTATACACGTTCACGAGTTCGGCGACACCAGCAACGGATGTACGTCCGCCGGGGAA 100663 ||||| | ||||| ||||| |||||||||| | ||||| || ||||||||||| | Sbjct 6884 CACGGCTTCCACGTGCACGAATTCGGCGACAATACAAACGGGTGCACGTCCGCCGGCGCT 6943 Query 100664 CATTTCAATCCTACGGGCCAAACGCACGGGGCGCCAAACGCGACCGTGCGTCACGTCGGC 100723 || ||||| || | || |||||| || || | ||| |||||||| ||||| ||| Sbjct 6944 CACTTCAACCCCAACAAGCAGGAGCACGGTGCACCCACCGCCACCGTGCGCCACGTTGGC 7003 Query 100724 GACTTGGGCAACGTCGA 100740 ||| | |||||| |||| Sbjct 7004 GACCTCGGCAACATCGA 7020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417995719102400