Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23]
60,470 sequences; 374,815,656 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq39759 125 7e-24
>seq39759
Length=128263
Score = 125 bits (138), Expect = 7e-24
Identities = 138/180 (77%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
|| || |||||||| || || ||||| || ||||||| || || ||||| || ||
Sbjct 66887 ATATAAGTATCAATCAGCAATGAGTACATCTCTGAGTGTACATTCTCCATAGCAATTTGG 66828
Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGT-ACCTCCGAGT-AAAATCTTTCTGCCA 14047
|| |||||||| | || ||||| |||| | | | || | || |||||| ||| |||
Sbjct 66827 AATCCATAAAAGAACCTTGCTTC--ACCAATTTGAACTTCTTGTGAAAATCGTTCCACCA 66770
Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT 14107
||||||||||||| ||||||||| ||| |||||||||||||||| | |||||||||||
Sbjct 66769 AGTTTTCATTAACTATACCATCAGAAGCAGCAAAAAATGCCAATACATGTTTAATAAAGT 66710
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/225 (70%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
||||||||||| ||| || || || ||||| || | || |||||||| || || ||
Sbjct 67334 CCTCATCTCTAGAAATTAGCTCATTGCTGAAA--GTCAGACCGGGCATCAAGCCCCGCTT 67277
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
|| ||||| ||||||| || || |||||||||||| ||||| || || || |||||
Sbjct 67276 CTTCAACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAA 67217
Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859
|| | || ||||| ||||| ||| |||| | ||||||| ||||| ||
Sbjct 67216 GGCAACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTC 67157
Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| ||||| || | | | | ||||| ||||||||||||||
Sbjct 67156 TGCCTTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAA 67112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478227046690800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |