Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq39759 125 7e-24 >seq39759 Length=128263 Score = 125 bits (138), Expect = 7e-24 Identities = 138/180 (77%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || || |||||||| || || ||||| || ||||||| || || ||||| || || Sbjct 66887 ATATAAGTATCAATCAGCAATGAGTACATCTCTGAGTGTACATTCTCCATAGCAATTTGG 66828 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGT-ACCTCCGAGT-AAAATCTTTCTGCCA 14047 || |||||||| | || ||||| |||| | | | || | || |||||| ||| ||| Sbjct 66827 AATCCATAAAAGAACCTTGCTTC--ACCAATTTGAACTTCTTGTGAAAATCGTTCCACCA 66770 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT 14107 ||||||||||||| ||||||||| ||| |||||||||||||||| | ||||||||||| Sbjct 66769 AGTTTTCATTAACTATACCATCAGAAGCAGCAAAAAATGCCAATACATGTTTAATAAAGT 66710 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||||||| ||| || || || ||||| || | || |||||||| || || || Sbjct 67334 CCTCATCTCTAGAAATTAGCTCATTGCTGAAA--GTCAGACCGGGCATCAAGCCCCGCTT 67277 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || ||||| ||||||| || || |||||||||||| ||||| || || || ||||| Sbjct 67276 CTTCAACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAA 67217 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || | || ||||| ||||| ||| |||| | ||||||| ||||| || Sbjct 67216 GGCAACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTC 67157 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | ||||| || | | | | ||||| |||||||||||||| Sbjct 67156 TGCCTTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAA 67112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478227046690800