Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23]
60,470 sequences; 374,815,656 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq27463 107 1e-18
seq33159 102 6e-17
seq32636 100 2e-16
seq18898 91.5 1e-13
>seq27463
Length=372575
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208
|| ||||| || ||||| || || || || || |||||||| || | | | | |
Sbjct 145651 CTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGACAAAGTGCGTCCA 145710
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| || |||||||| ||| | ||||| | ||| || || |||||| || ||||||
Sbjct 145711 TCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTG 145770
Query 15269 TCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| |||||| ||| |||||| |||| || || || ||| || ||||| || ||
Sbjct 145771 TCTTGAATTTTCGCT-TTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTAT 145829
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||||||| || || ||||| || || || |||||
Sbjct 145830 GGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865
>seq33159
Length=163697
Score = 102 bits (112), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212
|| || || ||||| || || || || |||||||| || | ||| | || | ||||
Sbjct 97912 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC--TGAGAGTGTGCGTCCATCTT 97855
Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272
||| || ||||| ||| | ||||| | || ||||| ||||| || || |||||
Sbjct 97854 CTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTT 97795
Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332
|||||| ||| ||| |||| || ||||| | || || || || || |||||||
Sbjct 97794 GAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTT 97735
Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||||| ||||||||||| || ||||||
Sbjct 97734 TACCAGTCAGTGTTTTTACAAAGATCTGCATA 97703
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||||||||| || || || || |||||||| || || | | | ||||||
Sbjct 98140 ACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCT 98081
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || ||||| ||| | ||||| | || ||||| ||||| ||||| |||||
Sbjct 98080 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 98021
Query 15275 ATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||||| ||| || ||| | || ||||| || || || || | || ||||||||
Sbjct 98020 ATTTTAGCT-TTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTTT 97962
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||| |||| |||||||| || || ||||||
Sbjct 97961 ACCAGTCAAGGTTTTTACGAAGATCTGCATA 97931
>seq32636
Length=346
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| |||||||| || || || ||||| || ||| || | | | ||||| | ||||
Sbjct 298 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCTTCCAGTTGT 239
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||||||| | |||| ||| || ||||| ||||| ||||| ||||| || ||
Sbjct 238 TTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTC 179
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||||||| | || ||||| || | || || || ||||| ||||||||||| ||
Sbjct 178 GCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTTTTACCAGTG 119
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || ||||||||
Sbjct 118 AGGGTCTTCACGAAGATTTGCAT 96
>seq18898
Length=402
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || |||||||| || || || || || ||||| ||| ||| | | | |||||
Sbjct 95 ACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTCC 154
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || ||||||||| |||||| ||| || ||||| ||||| || || |||||
Sbjct 155 AGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGG 214
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| ||| |||| || || || |||||| || | ||| || || ||
Sbjct 215 ATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTTT 274
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369
|| || || || || |||||||||||||| || ||
Sbjct 275 CCCGTTAGGGTCTTCACAAAAATTTGCATTTTGGA 309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361912281852270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |