Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq33159 91.5 1e-13 >seq33159 Length=163697 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 || ||||| || ||| ||| || || || ||||| || | | || |||| || Sbjct 97684 ACTAAATGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAGAGTGTGCGTCCATCTTCT 97625 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 || || || || ||||| ||||||||||||||||| | || | |||||| ||||| Sbjct 97624 AACTGCTTGCCAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGG 97565 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||||| | | | ||||| | || || || || | || || || ||| Sbjct 97564 ATTTTAGCCTTGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTA 97505 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || || ||||||||||| ||||||||| Sbjct 97504 CCCGTCAAGGTCTTCACAAAGATTTGCATG 97475 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||||||| | | |||||| || || || |||||||||||||| || ||| Sbjct 97474 CCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAA 97415 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | || |||| || | || || || ||||| || | |||||||| || | || Sbjct 97414 AGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGA 97355 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||||| |||||| ||||||| ||| || | ||| || |||| || ||||| Sbjct 97354 ATGCCTTCCTTATCTTGAATTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCACC 97295 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || |||| || || ||||| || ||||| Sbjct 97294 TCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354516136669560