Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq55175 262 3e-65 >seq55175 Length=171662 Score = 262 bits (290), Expect = 3e-65 Identities = 640/961 (67%), Gaps = 13/961 (1%) Strand=Plus/Plus Query 30231 TTACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTTAGTTCCCGTCC 30289 |||||| || || |||||||||||| || ||| |||| || | || | || | | Sbjct 39092 TTACTTCGTGGAATGGGGTGTTTACCCACGAAAATTCCCAGTCGATCGTA-TACCAATTC 39150 Query 30290 CCAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACG 30349 | || || || |||||||||||||| ||| | || | || || || ||||| || || | Sbjct 39151 CTAATCTGACTCATCTTTTGTATGGTTTTATTCCAATTTGTGGAGGCGATGGCATCAATG 39210 Query 30350 ATAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAG 30409 | || |||||| || | || ||| | ||| | || || ||| || || | Sbjct 39211 ACAGTTTAAAGGAAATCGAAGGCAGTTTTCAAGCTCTTCAGCGTTCATGCAGTGGCCGTG 39270 Query 30410 AGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAG 30469 | ||||| || || | ||||||||| ||||| ||||||||||| ||||| || || Sbjct 39271 AAGATTTCAAGGTTTCCATTCACGATCCTTGGGCTGCTCTTCAAAAGCCACAGAAGGGCT 39330 Query 30470 TGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGAC 30529 || ||||| | || || || ||||| |||||||| || |||||| | ||||| | Sbjct 39331 TGTCTTCTTGGAATGAACCTTACAAAGGCAATTTTGGTCAGCTGATGTCCCTTAAACAAG 39390 Query 30530 ACAATCCCGACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCTTTCT 30589 | || ||||||| || |||| || ||||| || ||||| ||| || ||||||| Sbjct 39391 CTAGGCCGGACCTTAAAATCCTACCTTCCATTGGGGGCTGGACTCTTGCTGATCCTTTCT 39450 Query 30590 TTAAATTGAGTTCTGCCGAA---AATCGCGCCGTTTTCGTTGAGTCCGCACGAGAGTATT 30646 | || | ||| | || || || | | |||||||| || | ||| | Sbjct 39451 TCTTTTTCA---CTGACAAAGTGAAGCGGGACCGCTTCGTTGATTCTGTGAAAGATTTCC 39507 Query 30647 TGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGGTAAAG 30706 | | || ||||| || || || || | |||||||| ||||| || || |||||||| | Sbjct 39508 TTCAAACCTGGAAGTTCTTCGATGGTGTTGACATCGATTGGGAATTCCCTGGCGGTAAGG 39567 Query 30707 GTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTTATTGA 30766 | ||||| ||||| | || | || |||| ||||||| | ||||| | || ||| Sbjct 39568 GAGCTAACCCCGACCTTGG-TAGCCCGAAA--GATGGAGAAGTTTATGTTGAACTAATGA 39624 Query 30767 AAGAGCTCAGAGAAATGCTAAACGATCTTTCTAAAGAAACAGGGAAAAAATACCAGCTCA 30826 | ||| | | |||||| ||||||| ||||| ||||||| || || |||||| |||||| Sbjct 39625 AGGAGTTGCGCGAAATGTTAAACGAGCTTTCCGAAGAAACGGGTAAGAAATACGAGCTCA 39684 Query 30827 CCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTA-TAGTTAATTATGAAAATGCGCAA 30885 |||| || ||||| || || | ||||| || || | | || |||| | || ||| Sbjct 39685 CCTCAGCTATTAGTGCTGGATGGGATAAGAT-TCAAGTCGTAGATTACAGCGAAGCCCAA 39743 Query 30886 GAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCTAACACG 30945 ||||| | || ||||| || | |||| ||||| || ||||| || ||||| ||| Sbjct 39744 AAGTATATGGACCACATCTTCCTCATGAGTTACGACTTCAAAGGTGCCTGGTCCAACGAC 39803 Query 30946 GACTTGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAAATATACT 31005 | | || |||| ||| | || ||| | || | ||||| | |||||| ||||| Sbjct 39804 ACCCTCGGTCATCAGACTCCCCTATATGCCCCTGCATGGAATCCCAAAGAAACTTATACC 39863 Query 31006 GCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAATAGTGCTA 31065 | || | | || | || | ||| || || |||||| || ||| || Sbjct 39864 ACTGATTTTGGTGTTAAATATTTACTTGCTCAAGGTGTGAACCCTAAGAAGATTGTGGTA 39923 Query 31066 GCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAACAATCCC 31125 | ||| || ||||||||| | || ||||| ||||| || | || |||||||| Sbjct 39924 GGTGTAGCTATGTACGGACGCGGCTGGACTGGTGTACACGGTTATGAAGGTAACAATCCA 39983 Query 31126 TTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGTAGATTAC 31185 || || || || || || | ||||| || ||| | ||| ||||| |||||| Sbjct 39984 TTCACTGGCAACGCCACAGGACCAGTAAAAGGTACATGGCAGGATGGTGTTGTTGATTAC 40043 Query 31186 A 31186 | Sbjct 40044 A 40044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420940747080470