Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq36549 84.2 3e-11 >seq36549 Length=56599 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 19355 ATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATG 19414 || ||| |||| || |||||||||||||| | || || || || || || || || Sbjct 14612 ATTCCTCAAATCGGCGATAAGTTTGCTTCACGTCATGGGCAGAAGGGGACCTGCGGAATT 14671 Query 19415 ATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATT 19474 ||| | |||||||||||||| |||||| || || | ||||| | |||||| Sbjct 14672 CAATATAGGCAAGAAGATATGCCATTTACTTGTGAGGGCCTCACACCGGACATAATTATT 14731 Query 19475 AACCCACATGCTTTTCCAAGTCGAATGAC 19503 |||||||||||| ||||| ||| ||||| Sbjct 14732 AACCCACATGCTATTCCATCTCGTATGAC 14760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595421595252000