Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq43576 129 3e-25 seq49364 127 1e-24 seq34419 127 1e-24 seq40680 122 5e-23 seq19064 122 5e-23 seq45427 116 2e-21 seq2234 116 2e-21 seq46927 114 7e-21 seq40248 114 7e-21 seq34047 114 7e-21 seq50234 96.9 2e-15 seq26806 91.5 8e-14 >seq43576 Length=256323 Score = 129 bits (142), Expect = 3e-25 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11438 ATTAATAAAAAAT--CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 |||| |||||||| ||| ||||||||||| |||||||||| |||||||||||||||| Sbjct 97987 ATTATTAAAAAATAACAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 97928 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 97927 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 97894 Score = 125 bits (138), Expect = 4e-24 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11442 ATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| | |||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 98681 ATAAAAACAATAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 98622 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 98621 GACGCTCTAACCAACTGAGCTAATGGGCCG 98592 Score = 122 bits (134), Expect = 5e-23 Identities = 89/103 (86%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGG-ATCGAACCTTCGACCTTC 11487 |||||| || ||| |||||| | | |||||||||| || |||||||| |||||||| Sbjct 1160 AAATATGAAAATAAATAAAAATGATAATGGCCCATGAGGGGGATCGAACCCGCGACCTTC 1219 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1220 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 1262 Score = 120 bits (132), Expect = 2e-22 Identities = 81/90 (90%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||||| | | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 99638 TAATAAAAAG-CTATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 99696 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 99697 CGACGCTCTAACCAACTGAGCTAATGGGCC 99726 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 105768 TAAAAAAACC--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 105711 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCGACG 11536 |||||| ||||||||||||||||||||| | ||| Sbjct 105710 CGCTCTAACCAACTGAGCTAATGGGCCGCCTACG 105677 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 100184 AAAAAATCG--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 100127 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 100126 GCTCTAACCAACTGAGCTAATGGGCC 100101 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 98989 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 99048 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 99049 CTGAGCTAATGGGCC 99063 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 101462 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 101521 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 101522 CTGAGCTAATGGGCC 101536 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||||||||| | |||||||| | ||||| ||||||| ||||| ||||| | || Sbjct 108134 AAAGTGGCCCATGAGGGAATCGAACCAGCAACCTTTGCGTTATAAGCACAACGCTTTAAC 108193 Query 11512 CAACTGAGCTAATGG 11526 ||||||||||||||| Sbjct 108194 CAACTGAGCTAATGG 108208 >seq49364 Length=96415 Score = 127 bits (140), Expect = 1e-24 Identities = 81/88 (92%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 85373 ATAAAAAAT--AATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 85316 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 85315 ACGCTCTAACCAACTGAGCTAATGGGCC 85288 >seq34419 Length=4840 Score = 127 bits (140), Expect = 1e-24 Identities = 80/87 (92%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 4031 AAAATATCAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 4090 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 4091 GCTCTAACCAACTGAGCTAATGGGCCG 4117 Score = 123 bits (136), Expect = 1e-23 Identities = 80/87 (92%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 3348 AAACAATCAA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 3406 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 3407 GCTCTAACCAACTGAGCTAATGGGCCG 3433 Score = 120 bits (132), Expect = 2e-22 Identities = 81/90 (90%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||||| | | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 2363 TAATAAAAAG-CTATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 2305 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 2304 CGACGCTCTAACCAACTGAGCTAATGGGCC 2275 Score = 120 bits (132), Expect = 2e-22 Identities = 82/91 (90%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 11440 TAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||||| || | ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 3058 TAATAAAAAGAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 3001 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 3000 ACGACGCTCTAACCAACTGAGCTAATGGGCC 2970 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1852 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1911 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1912 CTGAGCTAATGGGCC 1926 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 580 TGGCCTGTGAGGGGATCGAACCCTCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 521 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 520 TGAGCTAATGGGCC 507 >seq40680 Length=284256 Score = 122 bits (134), Expect = 5e-23 Identities = 80/88 (91%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 78897 AAAAATAAAATTATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 78838 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 78837 CGCTCTAACCAACTGAGCTAATGGGCCG 78810 >seq19064 Length=759256 Score = 122 bits (134), Expect = 5e-23 Identities = 87/99 (88%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 11432 TATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 |||| ||||||||||| | | |||||||||| |||||||||| |||||||||||| Sbjct 175136 TATA-AATTAATAAAATGT---AGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 175191 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||| ||||||||||||||||||||| Sbjct 175192 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 175230 >seq45427 Length=223668 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 161224 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 161283 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 161284 TGAGCTAATGGGCCGT 161299 >seq2234 Length=301525 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 40782 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 40723 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 40722 TGAGCTAATGGGCCGT 40707 Score = 114 bits (126), Expect = 7e-21 Identities = 82/94 (87%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11438 ATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 || || ||||| | || | |||||||||| |||||||||| |||||||||||||||| Sbjct 61157 ATGAACAAAAAGTAAATTCGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 61098 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 61097 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 61064 >seq46927 Length=587355 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 173258 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 173199 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 173198 TGAGCTAATGGGCCG 173184 >seq40248 Length=764491 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 17021 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 16962 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 16961 TGAGCTAATGGGCCG 16947 >seq34047 Length=401515 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 308956 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 309015 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 309016 TGAGCTAATGGGCCG 309030 Score = 95.1 bits (104), Expect = 6e-15 Identities = 74/88 (84%), Gaps = 7/88 (8%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | ||||||||||| |||||||||| |||||||||||||||| |||||| Sbjct 309450 TAAAAAAGC---TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTTGCACGA 309394 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||| |||||||||||||| Sbjct 309393 CGCTCTAACC----GAGCTAATGGGCCG 309370 >seq50234 Length=439 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 199 GGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCCAACCAACTGAGCTAATGGG 140 Query 11528 CC 11529 || Sbjct 139 CC 138 >seq26806 Length=97373 Score = 91.5 bits (100), Expect = 8e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| ||||| ||||| |||| ||||||||||||||||||||| |||||| |||||| Sbjct 10529 TGGCTCATGAGAGGATTGAACTCGCGACCTTCGCGTTATTAGCACATCGCTCTAACCAAC 10588 Query 11516 TGAGCTAATGGG 11527 |||||||||||| Sbjct 10589 TGAGCTAATGGG 10600 Lambda K H 0.638 0.409 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261298486705720