Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq27463 143 2e-29 seq33159 125 6e-24 seq36087 109 5e-19 seq33871 107 2e-18 seq16804 98.7 9e-16 seq32636 95.1 1e-14 seq18898 95.1 1e-14 seq410 89.7 5e-13 seq21507 87.8 2e-12 >seq27463 Length=372575 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||| | | ||| |||||||| | || |||||||| || | ||| || || | Sbjct 145639 CCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGAC 145698 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| ||| |||| |||||| ||| | ||||| ||||||||||||||||| ||| Sbjct 145699 AAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGA 145758 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | |||||| || || || ||| |||||||| | || || Sbjct 145759 ATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACC 145818 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||| |||||||| || || || ||||| || ||||||||||| Sbjct 145819 TCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865 >seq33159 Length=163697 Score = 125 bits (138), Expect = 6e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | ||||| ||||| || | ||| || || | | ||||| | ||| Sbjct 97913 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC--TGAGAGTGTGCGTCCATCT 97856 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| || || ||||| ||||| |||||||| || ||||| Sbjct 97855 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 97796 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | |||||| ||||| || | | ||| |||| | || || || | ||||||||| Sbjct 97795 TGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTT 97736 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || ||||| |||||||||||||| Sbjct 97735 TTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 120 bits (132), Expect = 3e-22 Identities = 170/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||||| || | ||||||||| | |||||||| ||||| | || | Sbjct 97482 TTTGCATGCCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGT 97423 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | ||| | ||||| || ||| || ||||| || || ||||||| | | |||||| Sbjct 97422 AGTCGG--AAAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTG 97365 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 |||||| ||||| ||||| || || | ||||||||| || || | | ||||| | Sbjct 97364 ATCTGGGGGAATGCCTTCCTTATCTTGAATTTTTGCTTTAACATTCTCAATGGTGTCTGA 97305 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | ||||| || || || || || ||||| ||||| |||||||| Sbjct 97304 TGGTTCCACCTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 Score = 116 bits (128), Expect = 3e-21 Identities = 172/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||||| || || | || ||||| | |||||||||||| || | Sbjct 97259 AAAAATCTGCATTCCTCCTCTTAAACGGAGGACTAAGTGAAGAGTAGATTCCTTCTGGAT 97200 Query 94828 GTTATAATCGCTCATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || || | || | | ||| | |||||||| |||||| ||| ||||||| || || Sbjct 97199 ATTGTAGT--CTGACAATGTACGTCCATCCTCCAACTGTTTGCCGGCAAAGATCAACCTC 97142 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| ||||| ||||| ||||| || || | || || ||||| || | | ||| Sbjct 97141 TGCTGGTCTGGGGGAATGCCTTCCTTATCTTGGATCTTCGCCTTAACATTTTCAATTGTG 97082 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | | || || || | |||||||| || ||||| | ||||| || || |||||| Sbjct 97081 TCGGAGGGTTCAACTTCCAATGTGATGGTCTTCCCAGTCAAGGTTTTGACGAAAATCTGC 97022 Query 95006 AT 95007 || Sbjct 97021 AT 97020 Score = 102 bits (112), Expect = 7e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 |||||| || | ||||| ||||| || | ||| || || | ||||| | ||| Sbjct 98141 CACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG--AGAGTGTGCGTCCATCT 98084 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 98083 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 98024 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||||| || || || | | ||||| | | | ||||| || | ||||||||| Sbjct 98023 TGGATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTT 97964 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| | ||||| || ||||||||||| Sbjct 97963 TTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | ||||| ||||| || | ||| || || | ||||| || |||| Sbjct 97001 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG--AGAGTGTACGACCATCC 96944 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 ||||||||||| ||| | ||||| || || ||||| ||||| ||||| || || ||||| Sbjct 96943 TCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 96884 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || || || || | | ||||| | | || || || | ||||| || Sbjct 96883 TGGATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTC 96824 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || |||||||| |||||||| Sbjct 96823 TTGCCGGTCAATGTCTTCACAAAAATCTGCAT 96792 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || || ||||| || | |||||| || | | ||||| | ||| || | ||| || | Sbjct 97672 GTGGACTCCTTCTGGATGTTATAGTC--TGAGAGTGTGCGTCCATCTTCTAACTGCTTGC 97615 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| || | |||||| ||||| ||||||||||| || || | ||||| |||| Sbjct 97614 CAGCAAAGATCAACCGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATTTTAGCCT 97555 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| ||| || || | | || || || | |||||||| || || || | | Sbjct 97554 TGACATTCTCGATGGTATCCGAAGGTTCAACTTCTAGGGTGATGGTCTTACCCGTCAAGG 97495 Query 94989 TTTTCACAAAGATCTGCATGC 95009 | ||||||||||| ||||||| Sbjct 97494 TCTTCACAAAGATTTGCATGC 97474 >seq36087 Length=321 Score = 109 bits (120), Expect = 5e-19 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || ||| || || |||| ||| || ||||| || | || || || Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| |||||| |||||||| || | ||||| | || ||||| || || || Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | ||||| ||||| || | | |||||||| | || || Sbjct 105 ATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACT 46 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | ||||||||| || || ||||| |||||||||||||||||| Sbjct 45 TCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq33871 Length=3159 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | ||||| ||||| || | ||| || || | ||||| | ||| Sbjct 2916 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG--AGAGTGTGCGTCCATCT 2973 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 2974 TCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 3033 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||||| || ||||| | | ||||| | | || || || | ||||||||| Sbjct 3034 TGGATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTT 3093 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || ||||| || ||||||||||| Sbjct 3094 TTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq16804 Length=240 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 ||||||||||||| || | ||||| | || || || ||||| |||||||| || |||| Sbjct 240 CCTCCAGCTGTTTACCAGCGAAGATGAGTCGCTGTTGGTCTGGGGGAATACCCTCCTTGT 181 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | || || ||||| || | | || |||| | || || || | ||||||| Sbjct 180 CCTGGATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGG 121 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || ||||||||||| ||||||||||||||||| Sbjct 120 TCTTGCCAGTAAGAGTCTTCACAAAGATCTGCAT 87 >seq32636 Length=346 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||| | ||| | || || ||||| || | |||||| ||| || ||| | Sbjct 310 CGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCA 251 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || ||||| ||||| || | ||||| | | ||||| ||||||||||| ||||| ||| Sbjct 250 TCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTG 191 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| || | | ||||| | | || || || | |||||| Sbjct 190 TCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATG 131 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| || || ||||| ||||| ||||| Sbjct 130 GTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq18898 Length=402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||||||||||| || | || || ||| | |||| ||| || Sbjct 94 CACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTC 153 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || | || || | | ||||| || ||||||||||| || ||||| | Sbjct 154 CAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG 213 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| || ||| |||||||| | || || || | ||||| || || Sbjct 214 GATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTT 273 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || |||||||| || ||||| Sbjct 274 TCCCGTTAGGGTCTTCACAAAAATTTGCAT 303 >seq410 Length=311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 94884 TTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAG 94943 ||||||||||||| ||||| || |||||||| | |||||| || || | ||| || Sbjct 1 TTTGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTAAATTTTCGATAG 60 Query 94944 TGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCT 95003 |||||| | || || || | ||| |||||||| || || || ||||| || ||||||| Sbjct 61 TGTCAGAGGCTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCT 120 Query 95004 GCAT 95007 |||| Sbjct 121 GCAT 124 >seq21507 Length=372 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||||| | ||||| ||| | ||||| || || || | || || || | Sbjct 248 CCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTC--TG 191 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | || || |||||||| || |||||||||| |||||||||||||| | Sbjct 190 AGAGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGG 131 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || || || ||||| | ||||| || || || ||| || || | | | || | Sbjct 130 GGATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAA 71 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || || || || || || || || |||||||| Sbjct 70 CCTCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447952347889200