Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006644.1 Length=16103 Score E Sequences producing significant alignments: (Bits) Value seq12651 102 8e-18 seq19064 100 3e-17 seq27266 89.7 5e-14 seq25777 89.7 5e-14 seq37121 87.8 2e-13 seq34298 86.0 6e-13 seq27910 86.0 6e-13 seq18914 86.0 6e-13 seq32037 84.2 2e-12 seq9387 84.2 2e-12 seq45494 82.4 8e-12 seq36069 82.4 8e-12 seq1086 82.4 8e-12 seq55543 80.6 3e-11 seq44712 80.6 3e-11 seq55078 78.8 1e-10 seq54457 78.8 1e-10 seq50736 78.8 1e-10 seq49992 78.8 1e-10 seq31684 78.8 1e-10 seq30058 78.8 1e-10 seq26696 78.8 1e-10 >seq12651 Length=67101 Score = 102 bits (112), Expect = 8e-18 Identities = 167/238 (70%), Gaps = 16/238 (7%) Strand=Plus/Plus Query 6560 AAAAATTTGGTATTCAATGACGTAGACTAAGTATGTTTAGAAACTGTTTACATTAATTTT 6619 |||||| ||| ||||||||| | | ||||| ||| | | | ||| |||| | | Sbjct 7025 AAAAATGCAGTACTCAATGACGCACGCCAAGTACGTTCA---ATTTTTTTTCTTAAATAT 7081 Query 6620 TAAATTTGGAACAAAATCTTTTTCGATTATTG-AAAATCACAACGATTATTTATGGCTTT 6678 |||||||| ||||| || || ||||||||||| ||| ||| |||||||| ||| Sbjct 7082 TAAATTTGCAACAATATTTTGTTCGATTATTGTAAAGTCATAACGATTA-------CTTG 7134 Query 6679 TATTTTACTTCATATCTTTTTGTAAA----AAATTAATTCtttt-tttCAAATAGCCTGT 6733 ||||| |||| ||||||||||||| | ||| | ||||| ||| ||||| | Sbjct 7135 ATTTTTATTTCAAATCTTTTTGTAAAGTGCACATTTTTACTTTTGTTTTCAATAGGTTTG 7194 Query 6734 TGAATGTGGACTCAGCTTAATTCTCACAATAAAACCGGTTTTCCTCGAATTCAATTAT 6791 |||| | ||||| |||| ||| | ||| | |||| ||| | ||| ||| ||||| Sbjct 7195 TGAACGGGGACTTCGCTTGATTTTTACAGTGAAACTGGTGATGTTCGGATTAGATTAT 7252 >seq19064 Length=759256 Score = 100 bits (110), Expect = 3e-17 Identities = 172/243 (71%), Gaps = 19/243 (8%) Strand=Plus/Minus Query 6560 AAAAATTTGG-TATTCAATGACGTAGACTAAGTATGTTTAGAAACTGTTTACATTAATTT 6618 ||||||| || || |||||| |||| | ||||||||| | | ||| | |||| | Sbjct 3079 AAAAATTGGGGTACTCAATGTCGTATGCCAAGTATGTTCAATTTTTTTTTTC-TTAAATG 3021 Query 6619 TTAAATTTGGAACAAAATCTTTTTCGATTATTGAAAA-TCACAACGATTATTTATGGCTT 6677 ||| ||||| || |||| ||| ||||||||||||| ||| | |||||| |||| Sbjct 3020 TTATATTTGCAAAAAAAAATTT--CGATTATTGAAAAGTCATACCGATTACTTAT----- 2968 Query 6678 TTATTTTACTTCATATCTTTTTGTAAA----AAATTAATTCtttttttCAAATAGCCTGT 6733 ||||| |||| || |||||||||| ||||| | |||||||| ||||| || Sbjct 2967 ---TTTTATTTCAAATATTTTTGTAAAGTGCAAATTTTTACTTTTTTTTTAATAGGCTTG 2911 Query 6734 TGAATGTGGACTCAGCTTAA-TTCTCACAATAAAACCGGTTTTCCTCGAATTCAATT-AT 6791 || ||||||| || || || | ||||| |||| | |||| ||| || |||| || Sbjct 2910 CAAACGTGGACTTGGCGCAATTTTTTACAATGAAACTGTTTTTGTTCGGATATAATTAAT 2851 Query 6792 ACA 6794 ||| Sbjct 2850 ACA 2848 Score = 84.2 bits (92), Expect = 2e-12 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 8557 AACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2908 AACGTGGACTTGGCGCAATTTTTTACAATGAAACTGTTTTTGTTCGGAT 2860 >seq27266 Length=676111 Score = 89.7 bits (98), Expect = 5e-14 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 254180 TGAACGTGGACTTGGCACAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 254129 >seq25777 Length=951174 Score = 89.7 bits (98), Expect = 5e-14 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT-TCCAACTA 8613 |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| || Sbjct 226133 TGAACGTGGACTTGGCGCGATTTTTTACAGTGAAACTGTTTTTGTTCGGATATTCAAGTA 226074 Query 8614 C 8614 | Sbjct 226073 C 226073 >seq37121 Length=339870 Score = 87.8 bits (96), Expect = 2e-13 Identities = 123/168 (73%), Gaps = 15/168 (9%) Strand=Plus/Minus Query 6560 AAAAATT-TGGTATTCAATGACGTAGACTAAGTATGTTTAGAAACTGTTTACATTAATTT 6618 ||||||| ||||| |||||||| | ||||| ||| | ||| ||| | | |||| Sbjct 107020 AAAAATTGTGGTACACAATGACGCACGTCAAGTACGTTCA-AAATTGTATTC-TTAAAAA 106963 Query 6619 TTAAATTTGGAACAAAATCTTTTTCGATTATTGAAAA-TCACAACGATTATTTATGGCTT 6677 ||||||||| || || | || ||||||||||||||| ||| |||||||| ||| Sbjct 106962 TTAAATTTGCAATAATTTTTTATTCGATTATTGAAAAGTCATAACGATTA-------CTT 106910 Query 6678 TTATTTTACTTCATATCTTTTTGTAAAA----AATTAATTCttttttt 6721 | ||| | |||| |||||||||||||| |||| | |||||||| Sbjct 106909 GTTTTTAATTTCAAATCTTTTTGTAAAATGCTAATTTTTACTTTTTTT 106862 >seq34298 Length=359693 Score = 86.0 bits (94), Expect = 6e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATTCCA 8609 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 229084 TGAACGTGAACTTGGCGCGATTTTTTACAGTGAAACTGTTTTTGTTCGGATTTCA 229138 >seq27910 Length=1596770 Score = 86.0 bits (94), Expect = 6e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 677413 TGAACGTGGACTTGGCGCGATTTTTTACAGTGAAACTCTTTTTGTTCGGATT 677464 Score = 80.6 bits (88), Expect = 3e-11 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||||||||||| | |||||||||||||||| |||||||||||||| Sbjct 680704 TGAACGTGGACTTGGCGCGACTTTTTACAGTGAAACTCTTTTTGTTCGGATT 680755 >seq18914 Length=266377 Score = 86.0 bits (94), Expect = 6e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 17623 TGAACGTGGACTTGGCGCGATTTTTTACAGTGGAACTGTTTTTGTTCGGATT 17674 >seq32037 Length=301052 Score = 84.2 bits (92), Expect = 2e-12 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 20524 TGAACGTAGACTTGGCGCGATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 20474 >seq9387 Length=219086 Score = 84.2 bits (92), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 22/180 (12%) Strand=Plus/Plus Query 6614 AATTTTTAAATTTGGAACAAAATCTTTTTCGATTATTGAAAA-TCACAACGATTATTTAT 6672 || |||||||||| |||||| | || ||||||||||||||| ||| |||||||| Sbjct 52363 AAATTTTAAATTTCGAACAATTTTTTGTTCGATTATTGAAAAGTCATAACGATTA----- 52417 Query 6673 GGCTTTTATTTTACTTCATATCTTTTTGTAAA----AAATTAATTC-tttttttCAAATA 6727 ||| | ||||| |||| |||| |||||||| ||||| | | |||||||| |||| Sbjct 52418 --CTTGTTTTTTATTTCAAATCTATTTGTAAATTGCAAATTTTTCCTTTTTTTTCCAATA 52475 Query 6728 GCCTGTTGAATGTGGACT----CAGCTTAATTCTCACAATAAAACCGGTTTTCCTCGAAT 6783 || ||| ||||| | ||| || || ||||| | |||| | |||| ||| || Sbjct 52476 ACC---GGAACGTGGAGTTGGCCAGATT--TTTTCACAGTGAAACTGTTTTTGTTCGTAT 52530 >seq45494 Length=967103 Score = 82.4 bits (90), Expect = 8e-12 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGA 8604 |||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 149773 TGAACGTGGACTTGGCGCGATTTTTTACATTGAAACTGTTTTTGTTCGGA 149822 >seq36069 Length=75084 Score = 82.4 bits (90), Expect = 8e-12 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 8557 AACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 40541 AACGTGGACTGGGCGCAATTTTTTACAGTGAAACTGTTTTTATTCGGATT 40492 >seq1086 Length=521645 Score = 82.4 bits (90), Expect = 8e-12 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 8556 GAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 512094 GAACGTGGACTTGGCGCGATTTTCTACAGTGAAACTGTTTTTGTTCGGAT 512143 >seq55543 Length=25828 Score = 80.6 bits (88), Expect = 3e-11 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8606 |||||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct 9020 TGAACGTGGAATTGGTGCGATTTTTTACAGTGAAACTGTTTTTGTTCGGATT 8969 >seq44712 Length=322019 Score = 80.6 bits (88), Expect = 3e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATTCC 8608 ||| |||||||||||| | |||||||||||||||||||||||||||||||| || Sbjct 298429 TGATCGTGGACTTGGCTCGATTTTTTACAGTGAAACTGTTTTTGTTCGGATGCC 298482 >seq55078 Length=414959 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct 175132 TGAACGTGGACTTTGCACGATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 175082 >seq54457 Length=58126 Score = 78.8 bits (86), Expect = 1e-10 Identities = 51/55 (93%), Gaps = 1/55 (2%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGATTCCA 8609 |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct 10865 TGAAAGTGGACTTGGCGCGATTTT-TACAGTGAAACTGTTTTTGTTCGGATTACA 10918 >seq50736 Length=1027846 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 |||||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct 272115 TGAACGTGTACTTGGCGCGATGTTTTACAGTGAAACTGTTTTTGTTCGGAT 272165 >seq49992 Length=41564 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 35915 TGAACATGGACTTGGCGCGATTTTTTAAAGTGAAACTGTTTTTGTTCGGAT 35965 >seq31684 Length=9212 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 |||||||||||||| ||| ||||||||||||||||||||||||||||| || Sbjct 863 TGAACGTGGACTTGACGCGATTTTTTACAGTGAAACTGTTTTTGTTCGAAT 813 >seq30058 Length=415187 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 |||||||||||||| ||| ||||||||||||||||||||||||||||| || Sbjct 411379 TGAACGTGGACTTGACGCGATTTTTTACAGTGAAACTGTTTTTGTTCGAAT 411329 >seq26696 Length=85229 Score = 78.8 bits (86), Expect = 1e-10 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 8555 TGAACGTGGACTTGGCGCAATTTTTTACAGTGAAACTGTTTTTGTTCGGAT 8605 ||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 31803 TGAACGTGGACTTGGTGCGATTTTTTACAGTGAAAATGTTTTTGTTCGGAT 31753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51375254092260