Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006648.1 Length=15158 Score E Sequences producing significant alignments: (Bits) Value seq25777 96.9 3e-16 seq34298 95.1 1e-15 seq20893 95.1 1e-15 seq36121 93.3 4e-15 seq39216 91.5 1e-14 seq18914 91.5 1e-14 seq55543 89.7 5e-14 seq37576 89.7 5e-14 seq31684 89.7 5e-14 seq27958 89.7 5e-14 seq23258 89.7 5e-14 seq54457 87.8 2e-13 seq49992 87.8 2e-13 seq38055 87.8 2e-13 seq32037 87.8 2e-13 seq27910 87.8 2e-13 seq55078 86.0 6e-13 seq50736 86.0 6e-13 seq26696 86.0 6e-13 seq1086 86.0 6e-13 seq45494 84.2 2e-12 seq44598 84.2 2e-12 seq25808 84.2 2e-12 seq13814 84.2 2e-12 seq56549 82.4 7e-12 seq53207 82.4 7e-12 seq44712 82.4 7e-12 seq30275 82.4 7e-12 seq27266 82.4 7e-12 seq18465 82.4 7e-12 seq30058 80.6 3e-11 seq19064 80.6 3e-11 seq12652 80.6 3e-11 seq50472 78.8 9e-11 seq32076 78.8 9e-11 seq30551 78.8 9e-11 >seq25777 Length=951174 Score = 96.9 bits (106), Expect = 3e-16 Identities = 66/72 (92%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 226143 AATGGGCTTGTGAACGTGGACTTGGCGCGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 226085 Query 10922 ATTATTCAATTA 10933 | ||||||| || Sbjct 226084 A-TATTCAAGTA 226074 Score = 87.8 bits (96), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 10393 aaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGA 10452 || |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 226080 AATATCCGAACAAAAACAGTTTCACTGTAAAAAA-TCGCGCCAAGTCCACGTTCACAAGC 226138 Query 10453 CTATT 10457 | ||| Sbjct 226139 CCATT 226143 >seq34298 Length=359693 Score = 95.1 bits (104), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 10373 TTATAATTACaaaaaatac-taaaatccaaacaaaaacagtttcactgtaaaaaaaTCGC 10431 || || ||| |||||||| | |||||| |||||||||||||||||||||||||| |||| Sbjct 229158 TTGTATTTAAAAAAAATATATGAAATCCGAACAAAAACAGTTTCACTGTAAAAAA-TCGC 229100 Query 10432 GCCAAGTCCACGTTCATAAGACTATT 10457 ||||||| |||||||| || ||||| Sbjct 229099 GCCAAGTTCACGTTCACGAGCCTATT 229074 Score = 87.8 bits (96), Expect = 2e-13 Identities = 58/63 (92%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 229074 AATAGGCTCGTGAACGTGAACTTGGCGCGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 229132 Query 10922 ATT 10924 ||| Sbjct 229133 ATT 229135 >seq20893 Length=477465 Score = 95.1 bits (104), Expect = 1e-15 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 10860 TTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTC 10919 ||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 473424 TTAATAGGCTTGTGAACGTGGACTTG-CGCGATTTTTA-ACAGTGAAACTGTTTTTGTTC 473367 Query 10920 GGATTATTCAATTAAAAATAG 10940 ||||||| |||| ||||| Sbjct 473366 GGATTATATAATTTCCAATAG 473346 Score = 86.0 bits (94), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 10386 aaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTT 10445 |||| || ||||| |||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct 473353 AAATTATATAATCCGAACAAAAACAGTTTCACTGTTAAAAA-TCGCGC-AAGTCCACGTT 473410 Query 10446 CATAAGACTATTAA 10459 || ||| ||||||| Sbjct 473411 CACAAGCCTATTAA 473424 >seq36121 Length=957833 Score = 93.3 bits (102), Expect = 4e-15 Identities = 72/82 (88%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 10379 TTACaa-aaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAG 10437 |||||| |||||| |||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct 331584 TTACAAGAAAATATTAAA-TCCAAACTAAAACAGATTCACTGTAAAAA--TCGCGCCAAG 331640 Query 10438 TCCACGTTCATAAGACTATTAA 10459 |||||||||| ||| |||||| Sbjct 331641 TCCACGTTCACAAGGTTATTAA 331662 Score = 78.8 bits (86), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 10860 TTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTC 10919 |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct 331662 TTAATAACCTTGTGAACGTGGACTTGGCGCGA--TTTTTACAGTGAATCTGTTTTAGTTT 331605 Query 10920 GGATT 10924 ||||| Sbjct 331604 GGATT 331600 >seq39216 Length=374493 Score = 91.5 bits (100), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 10387 aatactaaaat-ccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTT 10445 ||||| ||||| || ||| |||| |||| ||||||||||||| ||||||||||||||||| Sbjct 58406 AATACAAAAATTCCGAACCAAAATAGTTACACTGTAAAAAAAACGCGCCAAGTCCACGTT 58347 Query 10446 CATAAGACTATT 10457 || ||||||||| Sbjct 58346 CACAAGACTATT 58335 Score = 87.8 bits (96), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||||||| ||||||||||||||||||| ||||||||||||| |||| |||| |||||| Sbjct 58335 AATAGTCTTGTGAACGTGGACTTGGCGCGTTTTTTTTACAGTGTAACTATTTTGGTTCGG 58394 Query 10922 A 10922 | Sbjct 58395 A 58395 >seq18914 Length=266377 Score = 91.5 bits (100), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 10368 TTTCATTATAATTACaaaaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaa 10427 || || |||| |||||||||| |||||| ||||||||||||| |||||||||||| Sbjct 17699 TTACAATATA--TACAAAAAATTTAGAAATCCGAACAAAAACAGTTCCACTGTAAAAAA- 17643 Query 10428 TCGCGCCAAGTCCACGTTCATAAG 10451 |||||||||||||||||||| ||| Sbjct 17642 TCGCGCCAAGTCCACGTTCACAAG 17619 Score = 87.8 bits (96), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 10868 CTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGATTATT 10927 ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| | Sbjct 17619 CTTGTGAACGTGGACTTGGCGCGATTTTTT-ACAGTGGAACTGTTTTTGTTCGGATTTCT 17677 Query 10928 CAATT 10932 |||| Sbjct 17678 AAATT 17682 >seq55543 Length=25828 Score = 89.7 bits (98), Expect = 5e-14 Identities = 60/66 (91%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| | | |||||||||| |||| |||||||||| ||||||||||||||||||||||| Sbjct 9030 AATAGGCGTCTGAACGTGGAATTGGTGCGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 8972 Query 10922 ATTATT 10927 |||||| Sbjct 8971 ATTATT 8966 >seq37576 Length=110130 Score = 89.7 bits (98), Expect = 5e-14 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 || || ||| ||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 41567 AACAGGCTTGTGAACGTGGACTTGGCGCGATTTTT--AAAGTGAAACTGTTTTTGTTCGG 41624 Query 10922 ATTATTCAATT 10932 ||||| || || Sbjct 41625 ATTATACATTT 41635 Score = 82.4 bits (90), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 10384 aaaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACG 10443 |||||| || ||||| |||||||||||||||||| |||||| |||||||||||||||| Sbjct 41637 AAAAATG-TATAATCCGAACAAAAACAGTTTCACTTTAAAAA--TCGCGCCAAGTCCACG 41581 Query 10444 TTCATAAGACTATT 10457 |||| ||| || || Sbjct 41580 TTCACAAGCCTGTT 41567 >seq31684 Length=9212 Score = 89.7 bits (98), Expect = 5e-14 Identities = 59/64 (92%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 10860 TTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTC 10919 ||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 875 TTAATAGGCTTGTGAACGTGGACTTGACGCGA-TTTTTTACAGTGAAACTGTTTTTGTTC 817 Query 10920 GGAT 10923 | || Sbjct 816 GAAT 813 Score = 87.8 bits (96), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 10387 aatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTC 10446 |||| || || | |||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 804 AATATAAATATTCGAACAAAAACAGTTTCACTGTAAAAAA-TCGCGTCAAGTCCACGTTC 862 Query 10447 ATAAGACTATTAA 10459 | ||| ||||||| Sbjct 863 ACAAGCCTATTAA 875 >seq27958 Length=274874 Score = 89.7 bits (98), Expect = 5e-14 Identities = 58/63 (92%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 129994 AATAGGCTTGTGAACGTGGGCTTGGCGCGATTTTT--ACAGTGAAACTGTTTTTGTTCGG 129937 Query 10922 ATT 10924 ||| Sbjct 129936 ATT 129934 >seq23258 Length=736038 Score = 89.7 bits (98), Expect = 5e-14 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| || | |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 677264 AATAGGATTGTTAACGTGGACTTGGCGCGATTTTTTTACACTGAAACTGTTTTTGTTCGG 677323 Query 10922 AT 10923 || Sbjct 677324 AT 677325 Score = 86.0 bits (94), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| |||||||||||||||| |||||||||||||||||||||||||||| | || ||| Sbjct 677325 ATCCGAACAAAAACAGTTTCAGTGTAAAAAAATCGCGCCAAGTCCACGTTAACAATCCTA 677266 Query 10456 TT 10457 || Sbjct 677265 TT 677264 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 620417 AATAGGCTTGTAAACGTGGACTTGGCGCGA-TTTTTTACAGTAAAACTATTTTTGTTCGG 620359 Query 10922 AT 10923 || Sbjct 620358 AT 620357 >seq54457 Length=58126 Score = 87.8 bits (96), Expect = 2e-13 Identities = 74/89 (83%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 10872 TGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGATTATTCAAT 10931 |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 10865 TGAAAGTGGACTTGGCGCGATTTTT--ACAGTGAAACTGTTTTTGTTCGGATTACACAAT 10922 Query 10932 TAAAAATAGCAAAACGTCGAAGAATAATA 10960 | | || |||| | ||| ||||||| Sbjct 10923 CTATATTA-CAAAGAGAAGAATAATAATA 10950 >seq49992 Length=41564 Score = 87.8 bits (96), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct 35905 AATAGGCTTGTGAACATGGACTTGGCGCGATTTTTTAA-AGTGAAACTGTTTTTGTTCGG 35963 Query 10922 ATTAT 10926 || || Sbjct 35964 ATAAT 35968 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| |||||||||||||||||| ||||||| |||||||||||||| ||||| ||| ||| Sbjct 35965 ATCCGAACAAAAACAGTTTCACTTTAAAAAA-TCGCGCCAAGTCCATGTTCACAAGCCTA 35907 Query 10456 TT 10457 || Sbjct 35906 TT 35905 >seq38055 Length=430031 Score = 87.8 bits (96), Expect = 2e-13 Identities = 61/67 (91%), Gaps = 3/67 (4%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| |||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 299202 AATAGGCTTGTGAACGTGGACTTGGCGCGA--TTTTTACAGTGAAACTGTTTTTCTTCGG 299259 Query 10922 AT-TATT 10927 || |||| Sbjct 299260 ATATATT 299266 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| || |||||||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 299261 ATCCGAAGAAAAACAGTTTCACTGTAAAAA--TCGCGCCAAGTCCACGTTCACAAGCCTA 299204 Query 10456 TT 10457 || Sbjct 299203 TT 299202 >seq32037 Length=301052 Score = 87.8 bits (96), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 10387 aatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTC 10446 |||| | | |||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 20465 AATATTTATATCCGAACAAAAACAGTTTCACTGTAAAAAA-TCGCGCCAAGTCTACGTTC 20523 Query 10447 ATAAGACTATTAAGA 10461 | || ||||| ||| Sbjct 20524 ACAAACCTATTGAGA 20538 Score = 87.8 bits (96), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 10859 CTTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTT 10918 || ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 20537 CTCAATAGGTTTGTGAACGTAGACTTGGCGCGATTTTTT-ACAGTGAAACTGTTTTTGTT 20479 Query 10919 CGGAT 10923 ||||| Sbjct 20478 CGGAT 20474 >seq27910 Length=1596770 Score = 87.8 bits (96), Expect = 2e-13 Identities = 61/67 (91%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 10868 CTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGATTATT 10927 ||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| | Sbjct 677409 CTTGTGAACGTGGACTTGGCGCGATTTTTT-ACAGTGAAACTCTTTTTGTTCGGATT-TA 677466 Query 10928 CAATTAA 10934 | ||||| Sbjct 677467 CTATTAA 677473 Score = 84.2 bits (92), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 10394 aaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAG 10451 |||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct 677465 AAATCCGAACAAAAAGAGTTTCACTGTAAAAAA-TCGCGCCAAGTCCACGTTCACAAG 677409 Score = 84.2 bits (92), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 10860 TTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTC 10919 ||| || ||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct 680692 TTACTACGCTTGTGAACGTGGACTTGGCGCGACTTTTT-ACAGTGAAACTCTTTTTGTTC 680750 Query 10920 GGATTATTCAATTAA 10934 ||||| | | ||||| Sbjct 680751 GGATT-TACTATTAA 680764 Score = 80.6 bits (88), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 10394 aaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 10453 |||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||| Sbjct 680756 AAATCCGAACAAAAAGAGTTTCACTGTAAAAAG-TCGCGCCAAGTCCACGTTCACAAGCG 680698 Query 10454 TATTAA 10459 || ||| Sbjct 680697 TAGTAA 680692 >seq55078 Length=414959 Score = 86.0 bits (94), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| Sbjct 175142 AATAGGCTTGTGAACGTGGACTTTGCACGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 175084 Query 10922 AT 10923 || Sbjct 175083 AT 175082 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| |||||||||||||||||||||||||| ||| || ||||||||||||| ||| ||| Sbjct 175082 ATCCGAACAAAAACAGTTTCACTGTAAAAAA-TCGTGCAAAGTCCACGTTCACAAGCCTA 175140 Query 10456 TT 10457 || Sbjct 175141 TT 175142 >seq50736 Length=1027846 Score = 86.0 bits (94), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| |||||||| |||||||||||| |||| ||||||||||||||||||||||| Sbjct 272105 AATAGGCTTGTGAACGTGTACTTGGCGCGATGTTTT-ACAGTGAAACTGTTTTTGTTCGG 272163 Query 10922 AT 10923 || Sbjct 272164 AT 272165 Score = 84.2 bits (92), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 10373 TTATAATTACaaaaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCG 10432 || |||||| | | |||| | | ||| |||||||||||||||||||||||| | ||||| Sbjct 272187 TTTTAATTATACATAATATTCTA-TCCGAACAAAAACAGTTTCACTGTAAAACA-TCGCG 272130 Query 10433 CCAAGTCCACGTTCATAAGACTATT 10457 |||||| |||||||| ||| ||||| Sbjct 272129 CCAAGTACACGTTCACAAGCCTATT 272105 >seq26696 Length=85229 Score = 86.0 bits (94), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||| Sbjct 31813 AATAGGCTTGTGAACGTGGACTTGGTGCGATTTTTT-ACAGTGAAAATGTTTTTGTTCGG 31755 Query 10922 AT 10923 || Sbjct 31754 AT 31753 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| |||||||||| ||||||||||||||| |||| ||||||||||||||| ||| ||| Sbjct 31753 ATCCGAACAAAAACATTTTCACTGTAAAAAA-TCGCACCAAGTCCACGTTCACAAGCCTA 31811 Query 10456 TT 10457 || Sbjct 31812 TT 31813 >seq1086 Length=521645 Score = 86.0 bits (94), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 512083 AATAGGCTTGCGAACGTGGACTTGGCGCGATTTTCT-ACAGTGAAACTGTTTTTGTTCGG 512141 Query 10922 AT 10923 || Sbjct 512142 AT 512143 Score = 82.4 bits (90), Expect = 7e-12 Identities = 58/65 (89%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 10393 aaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGA 10452 || |||| ||||||||||||||||||||| |||| ||||||||||||||||||| ||| Sbjct 512146 AATATCCGAACAAAAACAGTTTCACTGTAGAAAA-TCGCGCCAAGTCCACGTTCGCAAGC 512088 Query 10453 CTATT 10457 ||||| Sbjct 512087 CTATT 512083 >seq45494 Length=967103 Score = 84.2 bits (92), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 149763 AATATACTTGTGAACGTGGACTTGGCGCGA-TTTTTTACATTGAAACTGTTTTTGTTCGG 149821 Query 10922 A 10922 | Sbjct 149822 A 149822 Score = 80.6 bits (88), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 10397 tccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTAT 10456 ||| |||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||| Sbjct 149822 TCCGAACAAAAACAGTTTCAATGTAAAAAA-TCGCGCCAAGTCCACGTTCACAAGTATAT 149764 Query 10457 T 10457 | Sbjct 149763 T 149763 >seq44598 Length=71769 Score = 84.2 bits (92), Expect = 2e-12 Identities = 70/82 (85%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 10379 TTACaaaaaatactaaaatccaaacaaaaa-cagtttcactgtaaaaaaaTCGCGCCAAG 10437 |||||||||| | | |||||| |||||||| ||||||||||||||||| |||| ||||| Sbjct 54637 TTACAAAAAAAA-TGAAATCCGAACAAAAAACAGTTTCACTGTAAAAA--TCGCACCAAG 54693 Query 10438 TCCACGTTCATAAGACTATTAA 10459 ||||||| ||||||||||| Sbjct 54694 CTTACGTTCACAAGACTATTAA 54715 >seq25808 Length=281812 Score = 84.2 bits (92), Expect = 2e-12 Identities = 56/62 (90%), Gaps = 3/62 (5%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 166833 AATAGGCTTGTGAACGTGGACGTGGCGCGATTTTTT---AGTGAAACTGTTTTTGTTCGG 166777 Query 10922 AT 10923 || Sbjct 166776 AT 166775 Score = 78.8 bits (86), Expect = 9e-11 Identities = 55/62 (89%), Gaps = 3/62 (5%) Strand=Plus/Plus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| |||||||||||||||||| |||||||||||||| ||||||||||| ||| ||| Sbjct 166775 ATCCGAACAAAAACAGTTTCACT---AAAAAATCGCGCCACGTCCACGTTCACAAGCCTA 166831 Query 10456 TT 10457 || Sbjct 166832 TT 166833 >seq13814 Length=100337 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 55662 AATAGGCTTGTGAACGTGGACTTGGTTTGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 55604 Query 10922 ATT 10924 ||| Sbjct 55603 ATT 55601 Score = 80.6 bits (88), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 10394 aaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 10453 |||||| |||||||||||||||||||||||||| || ||||||||||||||| ||| | Sbjct 55600 AAATCCGAACAAAAACAGTTTCACTGTAAAAAA-TCAAACCAAGTCCACGTTCACAAGCC 55658 Query 10454 TATT 10457 |||| Sbjct 55659 TATT 55662 >seq56549 Length=452280 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||| | ||| |||| |||||||| ||| |||||||||||||||||||||| ||||||||| Sbjct 439980 AATTGGCTTGTGAATGTGGACTTTGCGTGATTTTTTTACAGTGAAACTGTGTTTGTTCGG 439921 Query 10922 ATT 10924 ||| Sbjct 439920 ATT 439918 >seq53207 Length=72861 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| |||||||||||||||||||| |||||||| |||||||||||| |||||| Sbjct 64794 AATAGGCTTGTGAACGTGGACTTGGCGCGA--TTTTTACAATGAAACTGTTTTGGTTCGG 64737 Query 10922 AT 10923 || Sbjct 64736 AT 64735 Score = 78.8 bits (86), Expect = 9e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 10396 atccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 10455 |||| ||| |||||||||||| |||||||| |||||||||||||||||||| ||| ||| Sbjct 64735 ATCCGAACCAAAACAGTTTCATTGTAAAAA--TCGCGCCAAGTCCACGTTCACAAGCCTA 64792 Query 10456 TT 10457 || Sbjct 64793 TT 64794 >seq44712 Length=322019 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| | | ||| |||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 298419 AATAGGCGTGTGATCGTGGACTTGGCTCGATTTTTT-ACAGTGAAACTGTTTTTGTTCGG 298477 Query 10922 AT 10923 || Sbjct 298478 AT 298479 >seq30275 Length=148747 Score = 82.4 bits (90), Expect = 7e-12 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 10377 AATTACaaaaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAA 10436 |||||||||||||| | |||||| || |||||| ||||||||||||||||| |||||||| Sbjct 16329 AATTACAAAAAATA-TGAAATCCGAA-AAAAACTGTTTCACTGTAAAAAAA-CGCGCCAA 16273 Query 10437 GTCCACGTTCATAAGACTATT 10457 || ||||| || || ||||| Sbjct 16272 GT-CACGTCCACGAGCCTATT 16253 >seq27266 Length=676111 Score = 82.4 bits (90), Expect = 7e-12 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Minus Query 10872 TGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGATTAT 10926 |||||||||||||||| | ||||||| |||||||||||||||||||||||||||| Sbjct 254180 TGAACGTGGACTTGGCACAATTTTTT-ACAGTGAAACTGTTTTTGTTCGGATTAT 254127 >seq18465 Length=201428 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| ||| ||||||||| ||| ||||| |||||| ||||||||||||||||||||||| Sbjct 123693 AATAGGCTTGTGAACGTGGGCTTAGCGCGGTTTTTT-ACAGTGAAACTGTTTTTGTTCGG 123635 Query 10922 AT 10923 || Sbjct 123634 AT 123633 >seq30058 Length=415187 Score = 80.6 bits (88), Expect = 3e-11 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 10872 TGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGATTATTCA 10929 |||||||||||||| ||||||||||| ||||||||||||||||||||| || |||||| Sbjct 411379 TGAACGTGGACTTGACGCGATTTTTT-ACAGTGAAACTGTTTTTGTTC-GAATATTCA 411324 >seq19064 Length=759256 Score = 80.6 bits (88), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 10860 TTAATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTC 10919 ||||||| ||| |||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct 2922 TTAATAGGCTTGCAAACGTGGACTTGGCGCAATTTTTT-ACAATGAAACTGTTTTTGTTC 2864 Query 10920 GGAT 10923 |||| Sbjct 2863 GGAT 2860 >seq12652 Length=1706 Score = 80.6 bits (88), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 |||| ||| ||||||||||||||||||||||||||| ||| || ||||||||||||||| Sbjct 1552 AATAAGCTTGTGAACGTGGACTTGGCGCGATTTTTTT-CAGGGACACTGTTTTTGTTCGG 1610 Query 10922 A 10922 | Sbjct 1611 A 1611 >seq50472 Length=141277 Score = 78.8 bits (86), Expect = 9e-11 Identities = 66/79 (84%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 10379 TTACaaaaaatactaaaatccaaacaaaaacagtttcactgtaaaaaaaTCGCGCCAAGT 10438 |||||||||||| | ||||| |||||||||||||||||||| || ||| || |||| Sbjct 125953 TTACAAAAAATA-TGAAATCAGAACAAAAACAGTTTCACTGTCAATT--TCGGGCTAAGT 125897 Query 10439 CCACGTTCATAAGACTATT 10457 ||||||||| ||| ||||| Sbjct 125896 CCACGTTCACAAGCCTATT 125878 >seq32076 Length=101212 Score = 78.8 bits (86), Expect = 9e-11 Identities = 60/69 (87%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 10863 ATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGA 10922 |||| ||| |||||||||||| || ||| ||||| |||||||||||||||||||||||| Sbjct 39936 ATAGGCTTGAGAACGTGGACTTAGCACGAGTTTTT-ACAGTGAAACTGTTTTTGTTCGGA 39878 Query 10923 T--TATTCA 10929 | |||||| Sbjct 39877 TAGTATTCA 39869 >seq30551 Length=251680 Score = 78.8 bits (86), Expect = 9e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 10862 AATAGTCTTATGAACGTGGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGG 10921 ||||| | | |||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 2282 AATAGGCCTCTGAAAGTGGACTTGGCGCGATTTTT--ACAGTGAAACTGTTTTTGTTCGC 2339 Query 10922 AT 10923 || Sbjct 2340 AT 2341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48353368425810