Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006654.1 Length=13597 Score E Sequences producing significant alignments: (Bits) Value seq34298 96.9 3e-16 seq18914 95.1 1e-15 seq39216 93.3 4e-15 seq31684 91.5 1e-14 seq25777 89.7 4e-14 seq20893 89.7 4e-14 seq50736 87.8 2e-13 seq44598 87.8 2e-13 seq36121 87.8 2e-13 seq32037 87.8 2e-13 seq27958 87.8 2e-13 seq38055 86.0 5e-13 seq37576 86.0 5e-13 seq30275 86.0 5e-13 seq27910 86.0 5e-13 seq1086 86.0 5e-13 seq55078 84.2 2e-12 seq49992 84.2 2e-12 seq26696 84.2 2e-12 seq23258 84.2 2e-12 seq13814 84.2 2e-12 seq55543 82.4 7e-12 seq45494 82.4 7e-12 seq25808 82.4 7e-12 seq53207 80.6 2e-11 seq50472 80.6 2e-11 seq44712 80.6 2e-11 seq18465 80.6 2e-11 seq56549 78.8 8e-11 seq54457 78.8 8e-11 seq49527 78.8 8e-11 seq30058 78.8 8e-11 seq27266 78.8 8e-11 seq19064 78.8 8e-11 seq12652 78.8 8e-11 >seq34298 Length=359693 Score = 96.9 bits (106), Expect = 3e-16 Identities = 75/87 (86%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 229074 AATAGGCTCGTGAACGTGAACTTGGCGCGA--TTTTTTACAGTGAAACTGTTTTTGTTCG 229131 Query 231 gatttta-gtattttttgtaattataa 256 ||||| | |||||||| ||| || || Sbjct 229132 GATTTCATATATTTTTTTTAAATACAA 229158 Score = 87.8 bits (96), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 13285 AAAATCAATCGAATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCAC 13344 ||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 229146 AAAATATATGAAATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGCGCCAAGTTCAC 229089 Query 13345 GTTCATAAGACTATT 13359 ||||| || ||||| Sbjct 229088 GTTCACGAGCCTATT 229074 >seq18914 Length=266377 Score = 95.1 bits (104), Expect = 1e-15 Identities = 79/95 (83%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 177 CTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcggatttt 236 ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 17619 CTTGTGAACGTGGACTTGGCGCGA--TTTTTTACAGTGGAACTGTTTTTGTTCGGATTTC 17676 Query 237 agtattttttgta---attataataaaaatttaCA 268 |||||||||| ||| ||| | || ||| || Sbjct 17677 TAAATTTTTTGTATATATTGTAACATAATTTTTCA 17711 Score = 84.2 bits (92), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAG 13353 ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| Sbjct 17674 AATCCGAACAAAAACAGTTCCACTGT--AAAAAATCGCGCCAAGTCCACGTTCACAAG 17619 >seq39216 Length=374493 Score = 93.3 bits (102), Expect = 4e-15 Identities = 66/73 (90%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||||||| ||||||||||||||||||| |||||||||||||| |||| |||| ||||| Sbjct 58335 AATAGTCTTGTGAACGTGGACTTGGCGCG-TTTTTTTTACAGTGTAACTATTTTGGTTCG 58393 Query 231 g-attttagtatt 242 | ||||| ||||| Sbjct 58394 GAATTTTTGTATT 58406 Score = 86.0 bits (94), Expect = 5e-13 Identities = 57/62 (92%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 13298 TCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 13357 ||||||| |||| |||| |||||||||||||| ||||||||||||||||||| ||||||| Sbjct 58395 TCCGAACCAAAATAGTTACACTGTAAAAAAAA-CGCGCCAAGTCCACGTTCACAAGACTA 58337 Query 13358 TT 13359 || Sbjct 58336 TT 58335 >seq31684 Length=9212 Score = 91.5 bits (100), Expect = 1e-14 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgtt 228 ||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 875 TTAATAGGCTTGTGAACGTGGACTTGACGCGA--TTTTTTACAGTGAAACTGTTTTTGTT 818 Query 229 cggattttagtatt 242 || || || |||| Sbjct 817 CGAATATTTATATT 804 Score = 87.8 bits (96), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 || |||||||||||||||||||||||||||| ||||| |||||||||||||| ||| || Sbjct 813 ATTCGAACAAAAACAGTTTCACTGTAAAAAA--TCGCGTCAAGTCCACGTTCACAAGCCT 870 Query 13357 ATTAA 13361 ||||| Sbjct 871 ATTAA 875 >seq25777 Length=951174 Score = 89.7 bits (98), Expect = 4e-14 Identities = 60/66 (91%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 226143 AATGGGCTTGTGAACGTGGACTTGGCGCGA--TTTTTTACAGTGAAACTGTTTTTGTTCG 226086 Query 231 gatttt 236 ||| || Sbjct 226085 GATATT 226080 Score = 89.7 bits (98), Expect = 4e-14 Identities = 58/63 (92%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct 226083 ATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGCGCCAAGTCCACGTTCACAAGCCC 226140 Query 13357 ATT 13359 ||| Sbjct 226141 ATT 226143 >seq20893 Length=477465 Score = 89.7 bits (98), Expect = 4e-14 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgtt 228 ||||||| ||| ||||||||||||| |||||| ||||| |||||||||||||||||||| Sbjct 473424 TTAATAGGCTTGTGAACGTGGACTT-GCGCGA--TTTTTAACAGTGAAACTGTTTTTGTT 473368 Query 229 cggattttagtattt 243 |||||| || |||| Sbjct 473367 CGGATTATATAATTT 473353 Score = 86.0 bits (94), Expect = 5e-13 Identities = 60/66 (91%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| | Sbjct 473362 AATCCGAACAAAAACAGTTTCACTGT--TAAAAATCGCG-CAAGTCCACGTTCACAAGCC 473418 Query 13356 TATTAA 13361 |||||| Sbjct 473419 TATTAA 473424 >seq50736 Length=1027846 Score = 87.8 bits (96), Expect = 2e-13 Identities = 74/89 (83%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| |||||||| ||||||||||| | |||||||||||||||||||||||||| Sbjct 272105 AATAGGCTTGTGAACGTGTACTTGGCGCGA--TGTTTTACAGTGAAACTGTTTTTGTTCG 272162 Query 231 gattttagtattttttgtaattataataa 259 || | | |||| | | |||||| || || Sbjct 272163 GA-TAGAATATTATGTATAATTAAAACAA 272190 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||| || Sbjct 272165 ATCCGAACAAAAACAGTTTCACTGT--AAAACATCGCGCCAAGTACACGTTCACAAGCCT 272108 Query 13357 ATT 13359 ||| Sbjct 272107 ATT 272105 >seq44598 Length=71769 Score = 87.8 bits (96), Expect = 2e-13 Identities = 71/83 (86%), Gaps = 5/83 (6%) Strand=Plus/Minus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactg-tttttgt 227 ||||||||||| ||||||| ||||| |||| ||||||||||||||||| ||||||| Sbjct 54715 TTAATAGTCTTGTGAACGTAAGCTTGGTGCGA---TTTTTACAGTGAAACTGTTTTTTGT 54659 Query 228 tcggattttagtattttttgtaa 250 |||||||| | | |||||||||| Sbjct 54658 TCGGATTTCA-TTTTTTTTGTAA 54637 >seq36121 Length=957833 Score = 87.8 bits (96), Expect = 2e-13 Identities = 71/83 (86%), Gaps = 5/83 (6%) Strand=Plus/Minus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgtt 228 |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct 331662 TTAATAACCTTGTGAACGTGGACTTGGCGCGA---TTTTTACAGTGAATCTGTTTTAGTT 331606 Query 229 cggattttagtatttt-ttgtaa 250 ||| |||| |||||| |||||| Sbjct 331605 TGGA-TTTAATATTTTCTTGTAA 331584 >seq32037 Length=301052 Score = 87.8 bits (96), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 168 CTTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgt 227 || ||||| || ||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 20537 CTCAATAGGTTTGTGAACGTAGACTTGGCGCGA--TTTTTTACAGTGAAACTGTTTTTGT 20480 Query 228 tcggattttagtatt 242 |||||| | | |||| Sbjct 20479 TCGGATATAAATATT 20465 Score = 87.8 bits (96), Expect = 2e-13 Identities = 60/67 (90%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| |||||||||||||||||| ||||||| || || Sbjct 20474 ATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGCGCCAAGTCTACGTTCACAAACCT 20531 Query 13357 ATTAAGA 13363 ||| ||| Sbjct 20532 ATTGAGA 20538 >seq27958 Length=274874 Score = 87.8 bits (96), Expect = 2e-13 Identities = 58/64 (91%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| | Sbjct 129934 AATCCGAACAAAAACAGTTTCACTGT---AAAAATCGCGCCAAGCCCACGTTCACAAGCC 129990 Query 13356 TATT 13359 |||| Sbjct 129991 TATT 129994 >seq38055 Length=430031 Score = 86.0 bits (94), Expect = 5e-13 Identities = 57/63 (90%), Gaps = 3/63 (5%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| |||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct 299202 AATAGGCTTGTGAACGTGGACTTGGCGCGA---TTTTTACAGTGAAACTGTTTTTCTTCG 299258 Query 231 gat 233 ||| Sbjct 299259 GAT 299261 Score = 86.0 bits (94), Expect = 5e-13 Identities = 57/63 (90%), Gaps = 3/63 (5%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| || Sbjct 299261 ATCCGAAGAAAAACAGTTTCACTGTAAAAA---TCGCGCCAAGTCCACGTTCACAAGCCT 299205 Query 13357 ATT 13359 ||| Sbjct 299204 ATT 299202 >seq37576 Length=110130 Score = 86.0 bits (94), Expect = 5e-13 Identities = 65/75 (87%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 || || ||| |||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 41567 AACAGGCTTGTGAACGTGGACTTGGCGCGA---TTTTTAAAGTGAAACTGTTTTTGTTCG 41623 Query 231 gattttagtattttt 245 |||| || |||||| Sbjct 41624 GATTATA-CATTTTT 41637 Score = 82.4 bits (90), Expect = 7e-12 Identities = 57/64 (89%), Gaps = 3/64 (5%) Strand=Plus/Minus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| | Sbjct 41627 AATCCGAACAAAAACAGTTTCACTTT---AAAAATCGCGCCAAGTCCACGTTCACAAGCC 41571 Query 13356 TATT 13359 | || Sbjct 41570 TGTT 41567 >seq30275 Length=148747 Score = 86.0 bits (94), Expect = 5e-13 Identities = 71/82 (87%), Gaps = 5/82 (6%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| || || ||||| |||||||||| ||||||||||||||||| |||||| |||| Sbjct 16253 AATAGGCTCGTGGACGTG-ACTTGGCGCG--TTTTTTTACAGTGAAACAGTTTTT-TTCG 16308 Query 231 gattttagtattttttgtaatt 252 ||||| | |||||||||||||| Sbjct 16309 GATTTCA-TATTTTTTGTAATT 16329 >seq27910 Length=1596770 Score = 86.0 bits (94), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 2/59 (3%) Strand=Plus/Plus Query 177 CTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcggattt 235 ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 677409 CTTGTGAACGTGGACTTGGCGCGA--TTTTTTACAGTGAAACTCTTTTTGTTCGGATTT 677465 Score = 84.2 bits (92), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAG 13353 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| Sbjct 677464 AATCCGAACAAAAAGAGTTTCACTGT--AAAAAATCGCGCCAAGTCCACGTTCACAAG 677409 Score = 82.4 bits (90), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 2/67 (3%) Strand=Plus/Plus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgtt 228 ||| || ||| |||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 680692 TTACTACGCTTGTGAACGTGGACTTGGCGCGA--CTTTTTACAGTGAAACTCTTTTTGTT 680749 Query 229 cggattt 235 ||||||| Sbjct 680750 CGGATTT 680756 Score = 80.6 bits (88), Expect = 2e-11 Identities = 58/66 (88%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 680755 AATCCGAACAAAAAGAGTTTCACTGT--AAAAAGTCGCGCCAAGTCCACGTTCACAAGCG 680698 Query 13356 TATTAA 13361 || ||| Sbjct 680697 TAGTAA 680692 >seq1086 Length=521645 Score = 86.0 bits (94), Expect = 5e-13 Identities = 59/66 (89%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 512083 AATAGGCTTGCGAACGTGGACTTGGCGCGA--TTTTCTACAGTGAAACTGTTTTTGTTCG 512140 Query 231 gatttt 236 ||| || Sbjct 512141 GATATT 512146 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| || Sbjct 512143 ATCCGAACAAAAACAGTTTCACTGT--AGAAAATCGCGCCAAGTCCACGTTCGCAAGCCT 512086 Query 13357 ATT 13359 ||| Sbjct 512085 ATT 512083 >seq55078 Length=414959 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| ||||||||| || ||||||||||||| ||| || Sbjct 175082 ATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGTGCAAAGTCCACGTTCACAAGCCT 175139 Query 13357 ATT 13359 ||| Sbjct 175140 ATT 175142 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct 175142 AATAGGCTTGTGAACGTGGACTTTGCACGA--TTTTTTACAGTGAAACTGTTTTTGTTCG 175085 Query 231 gat 233 ||| Sbjct 175084 GAT 175082 >seq49992 Length=41564 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct 35905 AATAGGCTTGTGAACATGGACTTGGCGCGA--TTTTTTAAAGTGAAACTGTTTTTGTTCG 35962 Query 231 gat 233 ||| Sbjct 35963 GAT 35965 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||| || Sbjct 35965 ATCCGAACAAAAACAGTTTCACTTTAAAAAA--TCGCGCCAAGTCCATGTTCACAAGCCT 35908 Query 13357 ATT 13359 ||| Sbjct 35907 ATT 35905 >seq26696 Length=85229 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||| || Sbjct 31753 ATCCGAACAAAAACATTTTCACTGT--AAAAAATCGCACCAAGTCCACGTTCACAAGCCT 31810 Query 13357 ATT 13359 ||| Sbjct 31811 ATT 31813 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||||||| |||| ||||||||||||||| |||||||||||| Sbjct 31813 AATAGGCTTGTGAACGTGGACTTGGTGCGA--TTTTTTACAGTGAAAATGTTTTTGTTCG 31756 Query 231 gat 233 ||| Sbjct 31755 GAT 31753 >seq23258 Length=736038 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| || | |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 677264 AATAGGATTGTTAACGTGGACTTGGCGCGA-TTTTTTTACACTGAAACTGTTTTTGTTCG 677322 Query 231 gat 233 ||| Sbjct 677323 GAT 677325 Score = 84.2 bits (92), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||| ||| ||||||||||||||||||||||||| | || || Sbjct 677325 ATCCGAACAAAAACAGTTTCAGTGT-AAAAAAATCGCGCCAAGTCCACGTTAACAATCCT 677267 Query 13357 ATT 13359 ||| Sbjct 677266 ATT 677264 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||| ||||| ||||||||||| |||||||||||||||||| | ||| || Sbjct 620357 ATCCGAACAAAAATAGTTTTACTGTAAAAAA--TCGCGCCAAGTCCACGTTTACAAGCCT 620414 Query 13357 ATT 13359 ||| Sbjct 620415 ATT 620417 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| | |||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct 620417 AATAGGCTTGTAAACGTGGACTTGGCGCGA--TTTTTTACAGTAAAACTATTTTTGTTCG 620360 Query 231 gat 233 ||| Sbjct 620359 GAT 620357 >seq13814 Length=100337 Score = 84.2 bits (92), Expect = 2e-12 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 55662 AATAGGCTTGTGAACGTGGACTTGGTTTGA--TTTTTTACAGTGAAACTGTTTTTGTTCG 55605 Query 231 gattt 235 ||||| Sbjct 55604 GATTT 55600 Score = 82.4 bits (90), Expect = 7e-12 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| | Sbjct 55601 AATCCGAACAAAAACAGTTTCACTGT--AAAAAATCAAACCAAGTCCACGTTCACAAGCC 55658 Query 13356 TATT 13359 |||| Sbjct 55659 TATT 55662 >seq55543 Length=25828 Score = 82.4 bits (90), Expect = 7e-12 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGAC 13355 |||||||||||||||||||||||||| |||||||||| |||| |||||||||| | | | Sbjct 8969 AATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGCACCAATTCCACGTTCAGACGCC 9026 Query 13356 TATT 13359 |||| Sbjct 9027 TATT 9030 >seq45494 Length=967103 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 |||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 149763 AATATACTTGTGAACGTGGACTTGGCGCGA--TTTTTTACATTGAAACTGTTTTTGTTCG 149820 Query 231 ga 232 || Sbjct 149821 GA 149822 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 13298 TCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 13357 |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| || Sbjct 149822 TCCGAACAAAAACAGTTTCAATGTAAAAAA--TCGCGCCAAGTCCACGTTCACAAGTATA 149765 Query 13358 TT 13359 || Sbjct 149764 TT 149763 >seq25808 Length=281812 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 4/63 (6%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || Sbjct 166775 ATCCGAACAAAAACAGTTTCACT----AAAAAATCGCGCCACGTCCACGTTCACAAGCCT 166830 Query 13357 ATT 13359 ||| Sbjct 166831 ATT 166833 Score = 82.4 bits (90), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 4/63 (6%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 166833 AATAGGCTTGTGAACGTGGACGTGGCGCGATTTTTT----AGTGAAACTGTTTTTGTTCG 166778 Query 231 gat 233 ||| Sbjct 166777 GAT 166775 >seq53207 Length=72861 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 3/63 (5%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 |||||||| |||||||||||| |||||||| |||||||||||||||||||| ||| || Sbjct 64735 ATCCGAACCAAAACAGTTTCATTGTAAAAA---TCGCGCCAAGTCCACGTTCACAAGCCT 64791 Query 13357 ATT 13359 ||| Sbjct 64792 ATT 64794 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 3/63 (5%) Strand=Plus/Minus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| |||||||||||||||||||| |||||||| |||||||||||| ||||| Sbjct 64794 AATAGGCTTGTGAACGTGGACTTGGCGCGA---TTTTTACAATGAAACTGTTTTGGTTCG 64738 Query 231 gat 233 ||| Sbjct 64737 GAT 64735 >seq50472 Length=141277 Score = 80.6 bits (88), Expect = 2e-11 Identities = 67/80 (84%), Gaps = 4/80 (5%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| ||||||||||||| || ||| || ||||||||||||||||||||| Sbjct 125878 AATAGGCTTGTGAACGTGGACTTAGCCCGA---AATTGACAGTGAAACTGTTTTTGTTCT 125934 Query 231 gattttagtattttttgtaa 250 ||||| | |||||||||||| Sbjct 125935 GATTTCA-TATTTTTTGTAA 125953 >seq44712 Length=322019 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| | | ||| |||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 298419 AATAGGCGTGTGATCGTGGACTTGGCTCGA--TTTTTTACAGTGAAACTGTTTTTGTTCG 298476 Query 231 gat 233 ||| Sbjct 298477 GAT 298479 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| ||||||||| |||||||||||| ||| | | || Sbjct 298479 ATCCGAACAAAAACAGTTTCACTGT--AAAAAATCGAGCCAAGTCCACGATCACACGCCT 298422 Query 13357 ATT 13359 ||| Sbjct 298421 ATT 298419 >seq18465 Length=201428 Score = 80.6 bits (88), Expect = 2e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||||||| |||||| ||||| ||| ||||||||| ||| || Sbjct 123633 ATCCGAACAAAAACAGTTTCACTGT--AAAAAACCGCGCTAAGCCCACGTTCACAAGCCT 123690 Query 13357 ATT 13359 ||| Sbjct 123691 ATT 123693 >seq56549 Length=452280 Score = 78.8 bits (86), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 13295 GAATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGA 13354 ||||||||||||| ||||||||||||| ||||||||| ||| |||||||| |||| ||| Sbjct 439917 GAATCCGAACAAACACAGTTTCACTGT-AAAAAAATCACGCAAAGTCCACATTCACAAGC 439975 Query 13355 CTATT 13359 | ||| Sbjct 439976 CAATT 439980 >seq54457 Length=58126 Score = 78.8 bits (86), Expect = 8e-11 Identities = 50/54 (93%), Gaps = 3/54 (6%) Strand=Plus/Plus Query 181 TGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcggatt 234 |||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 10865 TGAAAGTGGACTTGGCGCGA---TTTTTACAGTGAAACTGTTTTTGTTCGGATT 10915 Score = 78.8 bits (86), Expect = 8e-11 Identities = 50/54 (93%), Gaps = 3/54 (6%) Strand=Plus/Minus Query 13296 AATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCA 13349 |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 10915 AATCCGAACAAAAACAGTTTCACTGT---AAAAATCGCGCCAAGTCCACTTTCA 10865 >seq49527 Length=1557 Score = 78.8 bits (86), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 ||||| ||| || ||||||||||| | |||||||||||||| ||||||| ||||||| || Sbjct 584 AATAGGCTTGTGTACGTGGACTTGCCACGATTTTTTTTACAATGAAACTATTTTTGTCCG 643 Query 231 gat 233 ||| Sbjct 644 GAT 646 Score = 78.8 bits (86), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||| ||||||| ||||||| |||||||||||||| | ||||||||||| || ||| || Sbjct 646 ATCCGGACAAAAATAGTTTCATTGTAAAAAAAATCGTGGCAAGTCCACGTACACAAGCCT 587 Query 13357 ATT 13359 ||| Sbjct 586 ATT 584 >seq30058 Length=415187 Score = 78.8 bits (86), Expect = 8e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 181 TGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcggattttagta 240 |||||||||||||| ||||| |||||||||||||||||||||||||||| || || || Sbjct 411379 TGAACGTGGACTTGACGCGA--TTTTTTACAGTGAAACTGTTTTTGTTCGAATATTCATA 411322 Query 241 tt 242 || Sbjct 411321 TT 411320 >seq27266 Length=676111 Score = 78.8 bits (86), Expect = 8e-11 Identities = 72/89 (81%), Gaps = 8/89 (9%) Strand=Plus/Minus Query 181 TGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcggattttagta 240 |||||||||||||||| | | |||||||||||||||||||||||||||||||| | Sbjct 254180 TGAACGTGGACTTGGCACAA--TTTTTTACAGTGAAACTGTTTTTGTTCGGATT---ATG 254126 Query 241 ttttttgtaattataat---aaaaattta 266 |||| ||| | || ||| |||||| || Sbjct 254125 TTTTATGTTAATAGAATTTCAAAAATATA 254097 >seq19064 Length=759256 Score = 78.8 bits (86), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 13297 ATCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACT 13356 ||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||| || Sbjct 2860 ATCCGAACAAAAACAGTTTCATTGT--AAAAAATTGCGCCAAGTCCACGTTTGCAAGCCT 2917 Query 13357 ATTAA 13361 ||||| Sbjct 2918 ATTAA 2922 Score = 78.8 bits (86), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 169 TTAATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgtt 228 ||||||| ||| |||||||||||||||| | ||||||||| |||||||||||||||| Sbjct 2922 TTAATAGGCTTGCAAACGTGGACTTGGCGCAA--TTTTTTACAATGAAACTGTTTTTGTT 2865 Query 229 cggat 233 ||||| Sbjct 2864 CGGAT 2860 >seq12652 Length=1706 Score = 78.8 bits (86), Expect = 8e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 171 AATAGTCTTATGAACGTGGACTTGGCGCGAttttttttacagtgaaactgtttttgttcg 230 |||| ||| ||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct 1552 AATAAGCTTGTGAACGTGGACTTGGCGCGATTTTTTT--CAGGGACACTGTTTTTGTTCG 1609 Query 231 ga 232 || Sbjct 1610 GA 1611 Score = 78.8 bits (86), Expect = 8e-11 Identities = 55/62 (89%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 13298 TCCGAACAAAAACAGTTTCACTGTaaaaaaaaTCGCGCCAAGTCCACGTTCATAAGACTA 13357 |||||||||||||||| || ||| ||||||||||||||||||||||||||| ||| || Sbjct 1611 TCCGAACAAAAACAGTGTCCCTG--AAAAAAATCGCGCCAAGTCCACGTTCACAAGCTTA 1554 Query 13358 TT 13359 || Sbjct 1553 TT 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 43361660991600