Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq3190 86.0 1e-12 >seq3190 Length=3733 Score = 86.0 bits (94), Expect = 1e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 17285 AGACATAAAATGTCATCAAGGTAGATAACCGATAAAAACCCCATCGACCTCAAGTAAGTC 17344 ||||||| |||||||| | ||| || || || || || ||| ||||| | || Sbjct 2115 AGACATAGGATGTCATCCAAGTATATGACAGACAACAAGCCCTGTGACCTTAGGTGTAAA 2056 Query 17345 ATAACTGGTTTCATGAGTTTCGTAAATACATATGG-GCTCTCACAGAGCCCAAAAAGTAA 17403 || ||||||||||| | ||| ||||| |||||||| || | ||| || |||||| | | Sbjct 2055 ATGACTGGTTTCATAATTTTTGTAAAAACATATGGTGCAGT-ACAAAGTCCAAAAGGAAG 1997 Query 17404 GCACGTAAATTCATATAACTGGGCCTGGAATCTAAATTTGAAATATTTTCTATTAC 17459 ||| || |||||||||| | |||| ||| ||| ||||| ||||||| || Sbjct 1996 GCAAGTGAATTCATATATAGAGCCCTGAAATTGAAAACGTAAATACTTTCTATCAC 1941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97904046420380