Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_006659.1 Length=41573 Score E Sequences producing significant alignments: (Bits) Value seq12651 87.8 5e-13 seq50622 80.6 7e-11 >seq12651 Length=67101 Score = 87.8 bits (96), Expect = 5e-13 Identities = 137/190 (72%), Gaps = 11/190 (6%) Strand=Plus/Plus Query 35918 AAACTTCTTAAGCTGATAATTGACATAAATAAATTATTTTAGTGATATTGTGAAGTCATT 35977 || || || || |||| | | || || ||| | |||| | | || ||||| || || ||| Sbjct 6949 AAGCTACTGAAACTGACATTCGATATGAATTAGTTATCTAAATGGTATTGGGACGTTATT 7008 Query 35978 TACAATGCA--TCAGAAAAAATTGGGGGTAGTCAATGACGCGCGCCAAGTACGTTTAAAA 36035 | |||| || | ||||||| | ||| |||||||||| ||||||||||||| | Sbjct 7009 TGCAATACAATTTTTAAAAAAT--GCAGTACTCAATGACGCACGCCAAGTACGTT---CA 7063 Query 36036 AATTGTTTTC--AATTGTTAAATTTGCCACAAAAACTT-TGCAATTATTG-AAAATCACA 36091 | || ||||| || | |||||||||| |||| | || | | ||||||| ||| ||| | Sbjct 7064 ATTTTTTTTCTTAAATATTAAATTTGCAACAATATTTTGTTCGATTATTGTAAAGTCATA 7123 Query 36092 GCGGTTACTT 36101 || |||||| Sbjct 7124 ACGATTACTT 7133 >seq50622 Length=286608 Score = 80.6 bits (88), Expect = 7e-11 Identities = 104/141 (74%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 35964 ATTGTGAAGTCATTTACAATGCATCAGAAAAAATTGGGGGTAGTCAATGACGCGCGCCAA 36023 |||| || || |||| |||| || |||||||| |||||| |||||||||| |||||| Sbjct 156140 ATTGAGATGTTATTTGCAATATATTTGAAAAAATGAGGGGTATTCAATGACGCACGCCAA 156081 Query 36024 GTACGTTTAAAAAATTGTTTTC--AATTGTTAAATTTGCCACAAAAACTTTGCAATTA-T 36080 ||||||| || || ||||| || ||| ||||||| ||| ||| | |||| | Sbjct 156080 GTACGTT---AAGTTTTTTTTCTGAAAGGTTTAATTTGCAACATTTTTTTTTCGATTAGT 156024 Query 36081 TGAAAATCACAGCGGTTACTT 36101 | ||| ||| | || |||||| Sbjct 156023 TAAAAGTCATAACGATTACTT 156003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132816558384900