Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq55175 345 4e-90 seq34861 120 3e-22 seq33159 96.9 3e-15 seq32636 91.5 1e-13 seq24526 89.7 5e-13 seq27267 86.0 6e-12 >seq55175 Length=171662 Score = 345 bits (382), Expect = 4e-90 Identities = 895/1348 (66%), Gaps = 47/1348 (3%) Strand=Plus/Plus Query 61905 TGTGCAATTCGGACGGATGCACTTCGAGTCAGCCGGTCGATGTCGTGATCGCAGACACGG 61964 |||||||| | ||||||||| | ||||| ||| || |||| | || || || | Sbjct 38947 TGTGCAATGCTGACGGATGCTCGACGAGTGAGCTCACTGAAATCGTCGTAGCTGATACCG 39006 Query 61965 ACGGCTCTCATCTAGCTCCATTATATTATGAATATC-----AG-GAATTAAATCAACCGT 62018 ||||| ||||||| |||||||| ||| ||| | || ||| |||| | || | Sbjct 39007 ACGGCAGTCATCTACCTCCATTA----ATGTATACCCTTGGAGAGAA--AAATAAGCCAT 39060 Query 62019 TCGA---GACTCGGGTCAAAAATAAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTT 62075 | | |||| || |||| || |||| || || || || |||||||| |||| Sbjct 39061 TTAAACAGACTTCGGGCAAA------GTTGTTGGAGCTTACTTCGTGGAATGGGGTGTTT 39114 Query 62076 ATCCTAGAAACTTTCCTGTAGATCGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATG 62135 | || |||| || || || ||||| | || | ||||||||| | ||| || | |||| Sbjct 39115 ACCCACGAAAATTCCCAGTCGATCGTATACCAATTCCTAATCTGACTCATCTTTTGTATG 39174 Query 62136 GATTTATTCCTATATGCGGCGGCGACGGCATTAACGACAGTCTCAAGACCATAACCGGTA 62195 | |||||||| || || || ||||| ||||| || |||||| | ||| || || | Sbjct 39175 GTTTTATTCCAATTTGTGGAGGCGATGGCATCAATGACAGTTTAAAGGAAATCGAAGGCA 39234 Query 62196 GTTTTGAAGCTCTTCAGCGGTCGTGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATG 62255 ||||| ||||||||||||| || || || || || || || || || || ||||| | Sbjct 39235 GTTTTCAAGCTCTTCAGCGTTCATGCAGTGGCCGTGAAGATTTCAAGGTTTCCATTCACG 39294 Query 62256 ACCCGTGGGCTGCCGTCCAGAAACCACAAAAACAAGTAACCGCTTGGAACGAACCATACA 62315 | || |||||||| | || || ||||| || | | ||||||| ||||| |||| Sbjct 39295 ATCCTTGGGCTGCTCTTCAAAAGCCACAGAAGGGCTTGTCTTCTTGGAATGAACCTTACA 39354 Query 62316 AAGGTAATTTTGGTCAATTGATGGCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTAC 62375 |||| ||||||||||| ||||| | |||| || | || || ||||| | ||| Sbjct 39355 AAGGCAATTTTGGTCAGCTGATGTCCCTTAAACAAGCTAGGCCGGACCTTAAAATCCTAC 39414 Query 62376 CTTCGATAGGCGGCTGGACATTATCCGATCCGTTCTTTTATTTTCAC-GATGTGGCCAAA 62434 |||| || || |||||||| | | ||||| ||||| | ||||||| || | || Sbjct 39415 CTTCCATTGGGGGCTGGACTCTTGCTGATCCTTTCTTCT-TTTTCACTGACAAAGTGAAG 39473 Query 62435 CGCAAGATTTTTGTCGATTCCGTCATAGAATTTTTACAGACCTGGAAATTTTTCGATGGT 62494 || | || || ||||| || | ||| || | || |||||||| || ||||||||| Sbjct 39474 CGGGACCGCTTCGTTGATTCTGTGAAAGATTTCCTTCAAACCTGGAAGTTCTTCGATGGT 39533 Query 62495 GTCGACATCGATTGGGAGTTTCCCGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTC 62554 || |||||||||||||| || || ||||| || || || || ||| || | || | | Sbjct 39534 GTTGACATCGATTGGGAATTCCCTGGCGGTAAGGGAGCTAACCCCGACCTTGG-TAGCCC 39592 Query 62555 GAACGCGATCGCGAAACGTACACGAT--TCTGTTGAGAGATTTACGCGAAGCCCTCGACC 62612 ||| ||| | ||| || | | | || ||| || || |||||| | || Sbjct 39593 GAA--AGATGGAGAA--GTTTATGTTGAACTAATGAAGGAGTTGCGCGAAATGTTAAACG 39648 Query 62613 GTCTCTCAATCGAAACGAATCGAACGTACGAATTGACTAGCGCGATCAGCGCCGGCGATG 62672 || || |||||| | | ||||| | || || || || || || | Sbjct 39649 AGCTTTCCGAAGAAACGGGTAAGAAATACGAGCTCACCTCAGCTATTAGTGCTGGATGGG 39708 Query 62673 ACAAAATTGCCGTAGTCGATTACACTGAAGCGCAAAAATATTTGGATTATAtttttttAA 62732 | || ||| || || ||||||| ||||| ||||| ||| |||| | || || | | Sbjct 39709 ATAAGATTCAAGTCGTAGATTACAGCGAAGCCCAAAAGTATATGGACCACATCTTCCTCA 39768 Query 62733 TGACATACGATTTCAAAGGAGCTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGT 62792 ||| ||||| |||||||| || ||||| || | | || |||| || | || | Sbjct 39769 TGAGTTACGACTTCAAAGGTGCCTGGTCCAACGACACCCTCGGTCATCAGACTCCCCTAT 39828 Query 62793 ACGCGCCTTCGTTTAACCCTAAAGAGCATTATACGACCGATTTTGCCGTTCGTGCTATGC 62852 | || ||| | | || || ||||| |||||| || ||||||| ||| | | | Sbjct 39829 ATGCCCCTGCATGGAATCCCAAAGAAACTTATACCACTGATTTTGGTGTTAAATATTTAC 39888 Query 62853 TCAAGCAAAAAGTCGAAAAC-AAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGT 62911 | ||| || ||| | || |||||| | || || || || |||||||| || || Sbjct 39889 TTGCTCAAGGTGT-GAACCCTAAGAAGATTGTGGTAGGTGTAGCTATGTACGGACGCGGC 39947 Query 62912 TGGACCGGCGT---CGGTGACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAG 62968 ||||| || || |||| | || | || |||||||| | |||| || | Sbjct 39948 TGGACTGGTGTACACGGTTA------TGAAGGTAACAATCCATTCACTGGCAACGCCACA 40001 Query 62969 GGACCGATCAAAGGTACCTGGGAGGACGGAGTCGTCGATTATAGAGAGATTTTTAATTCT 63028 ||||| | |||||||| ||| |||| || || || ||||| || || || ||| Sbjct 40002 GGACCAGTAAAAGGTACATGGCAGGATGGTGTTGTTGATTACAGGGAAATAGCAAATGAA 40061 Query 63029 TTTG---TGGGTAAAGACGGCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTC 63085 ||| |||| || | || | | | |||||| | | ||| |||| |||| || Sbjct 40062 ATTGCTATGGGCAA--ATGGGAGT-TCCATTACGACAACGTTGCAGAAGCCCCATATGTG 40118 Query 63086 TTTAATAACGCGACCGGCGATCTCATAACCTACGACAGTCCTCAGTCGGTTCTGGATAAA 63145 || | ||||||| || || ||||| ||||||| ||| | ||| | | || ||| Sbjct 40119 TTCAGGCCATCGACCGGTGACCTAATAACGTACGACAATCCGCGATCGACTATTGAGAAA 40178 Query 63146 GCAAAATATGTTTTGGACTATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGAC 63205 | || ||||| || |||| ||||| ||||| |||||||||||||||||||| ||| Sbjct 40179 GGCAAGTATGTGAGAAACAATAAACTGGGCGGTCTATTCGCGTGGGAGATCGATGCAGAC 40238 Query 63206 AACGGATTGCTTCTAAACGCAATGAACA 63233 || || || ||||||| ||||||| Sbjct 40239 AATGGCGAACTGTTAAACGCTATGAACA 40266 >seq34861 Length=230841 Score = 120 bits (132), Expect = 3e-22 Identities = 903/1430 (63%), Gaps = 53/1430 (4%) Strand=Plus/Plus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || ||||| ||||| | || || || ||||| | | ||| || ||||| |||||||| Sbjct 60378 ACCGTGAACTGAATTGCATTAGCGGCAGGTTTTATGCGCAAGTAATACATTCCCGTTTTC 60437 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT--ATAGGTTGGATTGG 147231 | |||| ||| ||| | ||| |||||| |||| || ||| ||| | || | | Sbjct 60438 AGACCCATTTTCCATGCATAAAAGTGAATCGATGTCAA--CTTGCCATAATTCGGTTCAG 60495 Query 147232 CCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGT 147291 ||||| || || | ||||| || ||||| || | | || | || || ||||| | Sbjct 60496 CCACATGAATGTTAAAAGATTGACTTTGATCTATAAATGCACCTCTGTCAGCAGCCATTT 60555 Query 147292 CCAACACTACTTTTTGTTT-------AATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATA 147344 || || |||||| |||||||||| | || || | | | ||| Sbjct 60556 -------TAATTGTTGTTTTAACAGAAATTTCCCAAACAGTTTTATACAATTGTCTAATA 60608 Query 147345 TTGTGTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTTTATCATG 147404 | | |||||| ||||||||||| | ||| || ||||| | ||| || | || | Sbjct 60609 TCCTTTGGAATCCGCTCAATATTTTGAATAGAACCATTGTTATGAATTATCTGATTCTTC 60668 Query 147405 ATATCTG--TCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCA 147462 || ||| || ||| | | || | | ||| | | || | ||| || || || | Sbjct 60669 ATGTCTTCATCCCATAGATCTGCCTGCGT-CAAGTCTCGCAACAA-ATGATGGTTTACAA 60726 Query 147463 CTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACG 147522 ||||| | || || || | ||| | || | ||| | || ||||| || || || | Sbjct 60727 CTTGAAATTCTCCAGATAAAACACGTCTTTGGTAAATGTTTGATGTAAATGGTTCAAATG 60786 Query 147523 ACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATG 147582 | || || || || | || ||||| || | |||||| ||||| || | || | || Sbjct 60787 ATTCATTATTTCCCAAGATTTGTGCTGTAGATGCCGTGGGCATTGGGGCTAATAAAAGTG 60846 Query 147583 AATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCA- 147641 ||||||| | || | | || |||| | ||| | | ||||| ||| |||||| Sbjct 60847 AATTGCGAAGTCCATATTTGGCAATTTTTTCCTTTAAAACAGTCCAGTCCCACAGATCAG 60906 Query 147642 TTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCA 147701 || || | || ||| ||||| |||| | || || | || ||||| || ||||| Sbjct 60907 TTGGAGT--TT--TATCCCACATATCATATTGCAAGATGCCCTGGCTTGCCGGACTTCCT 60962 Query 147702 TCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCAC 147759 || |||| | || ||| || || || |||||| ||| | ||| | ||| | Sbjct 60963 TCATAAGTACTATAAACTCCATGTTTTTCCGCGAGTTCGCAACT--GGCTTCTAATGCTC 61020 Query 147760 CATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTC-TAGCCTCTTGGCTGTCGTAG 147818 | || || || ||||| | || || || |||| | | | || |||| || || || Sbjct 61021 CGTAGTATATTGTTTCAAAGAT-TTGTTGGTTAAGTTTAATTGCGTCTTCACTTTCATAT 61079 Query 147819 GGCATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGG 147878 || || || || | || ||||| || | ||||| | || ||||| || |||| | Sbjct 61080 GGAATGCGCATAAGTACAAATGTATCGGCTAAACCTTGCACTCCAATACCTATCGGTCTG 61139 Query 147879 TGTCTGAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTT 147937 |||| | || || | ||| || || | || || | || | || || ||||| Sbjct 61140 TGTCGCATGTTAGAATTCTTTGCTTCTGGC-ACTGGGTAGTAGTTAACATCAATGATTTT 61198 Query 147938 ATTGAGATTAT-TGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAGCTTT 147996 ||| ||||| | || || || | | || | | | |||| | | ||| Sbjct 61199 ATTTAGATTCTGTGTTATTGTCT-TCGTGACTTCTTTCAATTTTGTAAAATTATATGTTT 61257 Query 147997 TAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTTT 148056 || | || ||| |||| |||||| ||||| || ||||||||||| || || || Sbjct 61258 TA---TCTTCATTAACAAATCTATTTAACGCAATTGAAGCCAAGTTACAGACTGCAACTT 61314 Query 148057 C-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCC 148115 | || || | |||||| ||| ||||| | ||||| ||| ||| | ||| || Sbjct 61315 CATCTGCTGAAG-TATATTCAACAATTTCAGTACACAAATTACTGCATTTAATGGTGCCA 61373 Query 148116 TCGtttttttGATTATTTTTATTGTTAACGTG-ATCTTTAAACATCATGTATGGAGCTCC 148174 |||||||||||| |||| | || || || |||||| ||| ||||||||| | || Sbjct 61374 AGATTTTTTTGATTACTTTTTCTATT-ACATGAATCTTTGTACAGCATGTATGGTGTGCC 61432 Query 148175 GGTCTCGACTTGAGTCTCAATAATT--TTTCTATGAAGATCTAAAGCCGAAATTTGTTTT 148232 || |||||||| | ||| || ||| ||| | || ||| ||| || ||| || Sbjct 61433 TGTTTCGACTTGTGCCTCTATTATTGCCTTCCA--CAGTTCTTGAGCTCGAACTTGCTTA 61490 Query 148233 TTAAACTTGCCTTCGGCCTCGTAATTTTCGTA-AAGGTCCTCGAATTCTTGGCCATAGCA 148291 ||| | ||| ||||| ||||| || || || || ||||||| || | || Sbjct 61491 ACGAACCTCTTTTCCTGTTCGTATTTTTCATATAATGT-TTCAAATTCTTCTCCCCAACA 61549 Query 148292 ATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTTAC 148351 ||| | ||| || || |||| |||||||| || ||| | | || | | || Sbjct 61550 GTCGGCAAGACCAGGGCAATCGTGAGGGCACATTAAACTCCACATTTCATCTTTTTCAAC 61609 Query 148352 CCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATC 148411 | |||||||| | |||||| |||| | ||| ||| | || | || | | || Sbjct 61610 ACGGTTCATAAATAAATCAGGAATCCATAAAGCATAAAATAATTCTCTTGCTCTTACCTC 61669 Query 148412 CTCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 || ||| |||| || ||||| ||||| |||||| || | |||||||| || Sbjct 61670 TTCTTTACCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAATGCCAAGGTTC 61729 Query 148472 GATGTATACGGTCATGGCGCCT-TTCCTT--TTACCTCCTTGATCGACAT 148518 | ||| | | | || ||| || || || |||||||| || |||| Sbjct 61730 TAAGTAAATTGCGAAAGCCCCTGGTCGTTTATTGCCTCCTTGGTCAACAT 61779 >seq33159 Length=163697 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| |||||| |||| || || | ||||| | || | ||| || Sbjct 97247 AATGCAGATTTTTGTTAAAACACTAACAGGGAAGACTATCACATTAGAGGTGGAACCATC 97306 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | || ||| ||| ||| || || ||||| || || || ||||| Sbjct 97307 AGACACCATTGAGAATGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGATCA 97366 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | | || || || |||||||||| | | | | |||||| || Sbjct 97367 GCAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCCGACTACAA 97426 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| | || |||| || | | |||||||| Sbjct 97427 TATTCAAAAAGAATCTACACTTCACTTGGTGCTCCGTTTGAGAGGAGG 97474 >seq32636 Length=346 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || || || | ||||| ||| | |||||| | ||| | || | Sbjct 95 AATGCAAATCTTCGTGAAGACCCTCACTGGTAAAACCATCACCTTGGAAGTGGAGCCTTC 154 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | || || ||||| ||||| ||||| || ||||| || || Sbjct 155 GGACACCATTGAGAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 214 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | || || | || ||||||||||| ||||||| | | | | | ||||||||| Sbjct 215 GCAGCGTCTGATCTTCGCTGGCAAACAACTGGAAGATGGTCGCACCCTGTCCGACTATAA 274 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || || || |||| || || ||| | || | || |||| Sbjct 275 CATCCAGAAGGAGTCCACCCTCCACCTTGTGCTGCGTCTCCGTGGTGGAA 324 >seq24526 Length=484089 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| ||||||||||| ||||| |||| || | ||| | || || || || || | Sbjct 59182 AAACCCATGATGAACTGTGGAACTCTGCACAACTGCAGATGGTAAAGGAAGGCAAGATGC 59241 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | || | ||| |||||||||||| || |||||||| || ||||| | || ||| ||| Sbjct 59242 ATGGCTTCCTCCGCATGTACTGGTGTAAGAAGATTCTAGAATGGACGCCAAGTCCAGAGG 59301 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | || || | ||| | || || | || ||| |||||| | ||||| | || || | Sbjct 59302 ATGCACTTAAATATGCGATATACTTGAATGATCATTACAGTATAGACGGCAGAGACCCCA 59361 Query 71850 ACGGTTATGTCGGT 71863 | || ||||| ||| Sbjct 59362 ATGGATATGTTGGT 59375 >seq27267 Length=86652 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 115204 CACGGATTTCATGTTCACGAATTCGGCGACACGAGCAACGGCTGCACGTCTGCAGGCGAG 115263 ||||| || || || |||||||||||||||| | ||||| |||||||| || |||| Sbjct 6884 CACGGCTTCCACGTGCACGAATTCGGCGACAATACAAACGGGTGCACGTCCGCCGGCGCT 6943 Query 115264 CATTTTAACCCTACGAACATGGCTCACGGTGCGCCCAACTCTGCCGTTCGTCACGTCGGT 115323 || || ||||| | || || |||||||| |||| | | |||| || ||||| || Sbjct 6944 CACTTCAACCCCAACAAGCAGGAGCACGGTGCACCCACCGCCACCGTGCGCCACGTTGGC 7003 Query 115324 GATCTTGGCAATATTGATGC 115343 || || ||||| || || || Sbjct 7004 GACCTCGGCAACATCGAGGC 7023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478300591058400