Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq34861 161 3e-34 >seq34861 Length=230841 Score = 161 bits (178), Expect = 3e-34 Identities = 566/873 (65%), Gaps = 18/873 (2%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| |||| | || ||||||||| ||||||| || |||| || |||||| | || Sbjct 62146 ATTGCTGAAAGACCACAGCATATGCTAATGCGAGTCTCTATCGGGATCCATGGTGAAGAC 62087 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACG 363556 ||||||| || || ||||| || || ||| | || ||| | ||||| || | Sbjct 62086 ATTGATGCAGCCATAGAAACCTACAA-CTTGT---TG-TCGGAAAAATATTTCACTCATG 62032 Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC 363616 | | || ||| ||| | ||| | ||||| | || || | ||||||||||| || Sbjct 62031 CAAGTCCCACATTGTTCTCTGCAGCAACTCCAAGACCGCAATTATCTTCTTGCTTCCTCA 61972 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 || |||||| || ||| ||| || ||||| | ||||||| | || | ||||| | | Sbjct 61971 TAGCAATGAAAGATGATAGCATTGAAGGTATATATGACACATTAAAACAATGTGCATTAA 61912 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAAC--AG 363734 ||||||| || || || ||||| ||| || || ||| | || || | Sbjct 61911 TTTCCAAATCAGCTGGTGGTATTGGAGTAC--ATGTTCATTGTATCAGATCAAAAGGTAC 61854 Query 363735 TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||| || || ||| || ||||| || || || ||| | | |||| | Sbjct 61853 CTACATAGCTGGTACTAACGGAGTTTCCAATGGTCTTGTACCAATGTTGAGAGTGTACAA 61794 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 ||||| || ||||| || ||||| || || || || |||||| || || || || Sbjct 61793 TAATACAGCTAGGTATGTTGACCAAGGAGGCAATAAACGACCAGGGGCTTTCGCAATTTA 61734 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | || ||| ||| | ||| ||||||||||| | || || || || || || || Sbjct 61733 CTTAGAACCTTGGCATTCTGATGTTTTTGAGTTTTTAGATCTGAAAAAGAATACTGGTAA 61674 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||| || | | ||| | || | || ||||| | ||| || |||| |||||||| Sbjct 61673 AGAAGAGGTAAGAGCAAGAGAATTATTTTATGCTTTATGGATTCCTGATTTATTTATGAA 61614 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 || || || || | | | ||| | | ||||| ||||| || || |||||| | Sbjct 61613 CCGTGTTGAAAAAGATGAAATGTGGAGTTTAATGTGCCCTCACGATTGCCCTGGTCTTGC 61554 Query 364035 CGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 ||| ||| ||||| || || | || | |||| ||||| || ||| ||| | ||| Sbjct 61553 CGACTGT-TGGGGAGAAGAATTTGAAACATTATATGAAAAATACGAACAGGA-AAAGAGG 61496 Query 364094 CTCG-TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 ||| |||| | ||| || || | || ||| || || || || | || | || Sbjct 61495 TTCGTTAAGCAAGTTCGAGCTCAAGAACTGTGGAAGGCAATAATAGAGGCACAAGTCGAA 61436 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 ||||| ||||| || ||| ||||||||||||| || || | || || || | | Sbjct 61435 ACAGGCACACCATACATGCTGTACAAAGATTCATGTAATAGAAAAAGTAATCAAAAAAAT 61376 Query 364213 CTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 ||||| || ||| | || || | ||||| || ||| ||||||| || | | || Sbjct 61375 CTTGGCACCATTAAATGCAGTAATTTGTGTACTGAAATTGTTGAATATACTTCAGCAGAT 61316 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 || ||| || |||||| | || || || ||| Sbjct 61315 GAAGTTGCAGTCTGTAACTTGGCTTCAATTGCG 61283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302343798287540