Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq34861 158 1e-33 seq27267 127 2e-24 seq33159 125 7e-24 seq32636 122 8e-23 seq33871 116 3e-21 seq21507 100 3e-16 seq18898 95.1 1e-14 seq36087 86.0 6e-12 seq28415 86.0 6e-12 seq10121 86.0 6e-12 >seq34861 Length=230841 Score = 158 bits (174), Expect = 1e-33 Identities = 673/1058 (64%), Gaps = 9/1058 (1%) Strand=Plus/Plus Query 144737 GCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAG 144796 || || || || ||||||| || ||||| |||||||| || ||| ||| | || Sbjct 60399 GCGGCAGGTTTTATGCGCAAGTAATACATTCCCGTTTTCAGACCCATTTTCCATGCATAA 60458 Query 144797 TCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGG 144856 ||| ||||| |||| | | || | || || |||||| | || | ||||| Sbjct 60459 AAGTGAATCGATGTCAACTTGCCATAATTCGGTTCAGCCACATGAATGTTAAAAGATTGA 60518 Query 144857 CTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATT 144916 |||||||| || || || | ||| || ||||| | ||| | ||| ||| Sbjct 60519 CTTTGATCTATAAATGCACCTCTGTCAGCAGCCATTTTAATTGTTGTTTTAACAGAAATT 60578 Query 144917 TCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATC 144976 |||||| | || || ||||| || |||| | | ||||| | ||||| ||||| Sbjct 60579 TCCCAAACAGTTTTATACAATTGTCTAATATCCTTTGGAATCCGCTCAATATTTTGAATA 60638 Query 144977 GACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATC 145036 || || |||| || ||| ||| ||| || | || | | || || Sbjct 60639 GAACCATTGTTATGAATTATCTGATTCTTCATGTCTTCATCCCATAGATCTGCCTGCGTC 60698 Query 145037 AAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAA 145096 ||||| | || | || || || || ||||| || || | || ||||| | Sbjct 60699 AAGTCTCGCAACAAATGATGGTTTACAACTTGAAATTCTCCAGATAAAACACGTCTTTGG 60758 Query 145097 TACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTT 145156 || | ||| || || || |||||||| || || ||||| |||| |||||| || || | | Sbjct 60759 TAAATGTTTGATGTAAATGGTTCAAATGATTCATTATTTCCCAAGATTTGTGCTGTAGAT 60818 Query 145157 GCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCC 145216 || |||||||| || | || | ||||||||| || || | || || | |||| Sbjct 60819 GCCGTGGGCATTGGGGCTAATAAAAGTGAATTGCGAAGTCCATATTTGGCAATTTTTTCC 60878 Query 145217 TTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAA 145276 |||| | ||| ||||| || ||| || | |||||||| || || ||||| Sbjct 60879 TTTAAAACAGTCCAGTCCCACAGATCAGTTGGAGTTTTATCCCACATATCATATTGCAAG 60938 Query 145277 ATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGA 145334 ||||||| ||| || || || |||| | | | ||| ||| | ||| ||||| |||| Sbjct 60939 ATGCCCTGGCTTGCCGGACTTCCTTCATAAGTACTATAAA--CTCCATGTTTTTCCGCGA 60996 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 | |||||||| || || | || ||| | || ||||| || ||||| ||| || Sbjct 60997 GTTCGCAACTGGCTTCTAATGCTCCGTAGTATATTGTTTCAAAGATTTGTTGGTTAAGTT 61056 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 || || || || || || || || ||||||| |||||||| | |||||| | || | Sbjct 61057 TAATTGCGTCTTCACTTTCATATGGAATGCGCATAAGTACAAATGTATCGGCTAAACCTT 61116 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGA 145513 | | ||| | || || || | ||| |||||| || | || || | | || Sbjct 61117 GCACTCCAATACCTATCGGTCTGTGTCGCATGTTAGAATTCTTTGCTT-CTGGCACTGGG 61175 Query 145514 TATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGC 145573 || ||| || || |||||||| | || | || | ||| || | | | Sbjct 61176 TAGTAGTTAACATCAATGATTTTATTTAGATTCTGTGTTATTGTCTTCGTGACTTCTTTC 61235 Query 145574 AACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGAC 145633 || ||| ||| | | | || ||| || | | ||||| | || || || Sbjct 61236 AATTTTGTAAAATTATATGTTTTATCTTCATTAACAA---ATCTATTTAACGCAATTGAA 61292 Query 145634 GCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAA 145693 ||||| ||||| ||||| || || || | |||| || || || | |||||| Sbjct 61293 GCCAAGTTACAGACTGCAACTTCATCTGCTGAAGTATATTCAACAATTTCAGTACACAAA 61352 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 || || ||||| ||||| || ||||||| ||||||||||| || || || | || ||| Sbjct 61353 TTACTGCATTTAATGGTGCCAAGATTTTTTTGATTACTTTTTCTATTACATGAATCTTTG 61412 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTC 145791 || |||||||| ||| ||| || || || || | ||| Sbjct 61413 TACAGCATGTATGGTGTGCCTGTTTCGACTTGTGCCTC 61450 >seq27267 Length=86652 Score = 127 bits (140), Expect = 2e-24 Identities = 116/145 (80%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 51800 TGGCCTCTATGTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGT 51859 ||||||| ||||||||||| ||||| ||||| ||| ||| || | ||||||| ||||| | Sbjct 7025 TGGCCTCGATGTTGCCGAGGTCGCCAACGTGGCGCACGGTGGCGGTGGGTGCACCGTGCT 6966 Query 51860 ---GTTTGCCAAGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGC 51916 | ||| ||| || ||||| |||||||||||||||||||||| | |||||| Sbjct 6965 CCTGCTTGTT---GGGGTTGAAGTGAGCGCCGGCGGACGTGCACCCGTTTGTATTGTCGC 6909 Query 51917 CGAACTCGTGCACGTGAAAGCCGTG 51941 |||| ||||||||||| |||||||| Sbjct 6908 CGAATTCGTGCACGTGGAAGCCGTG 6884 >seq33159 Length=163697 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| ||||| | ||| |||||||| || |||||||| || Sbjct 98158 CCGCCACGAAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 98099 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || |||||||||||||| ||| |||| || | ||||||||| || || Sbjct 98098 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 98039 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| || | | ||| | || || | || ||||| Sbjct 98038 ATGCCTTCCTTGTCCTGGATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACT 97979 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||||||| || | ||||||||||| |||||||| Sbjct 97978 TCCAGAGTGATGGTTTTACCAGTCAAGGTTTTTACGAAGATCTGCAT 97932 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||| |||||||| || |||||||| || Sbjct 97930 CCACCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 97871 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || |||||||||||||| ||| |||| || | ||||||||| || || Sbjct 97870 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 97811 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||||| ||| | | || | |||||| | | ||| | Sbjct 97810 ATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACT 97751 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||||||| || || |||||||| || |||||||| Sbjct 97750 TCCAATGTGATGGTTTTACCAGTCAGTGTTTTTACAAAGATCTGCAT 97704 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | |||||| ||||| || || | || || || |||||||| ||||| ||| Sbjct 97475 GCCTCCTCTCAAACGGAGCACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGA 97416 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || |||||||| || || |||| | ||| ||||| || || || Sbjct 97415 AAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGG 97356 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 || ||||| || || ||| ||| ||||| | | | ||| | || || | | || | Sbjct 97355 AATGCCTTCCTTATCT-TGAATTTTTGCTTTAACATTCTCAATGGTGTCTGATGGTTCCA 97297 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || ||||| ||||| || ||||||||||| Sbjct 97296 CCTCTAATGTGATAGTCTTCCCTGTTAGTGTTTTAACAAAAATCTGCAT 97248 >seq32636 Length=346 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | ||| |||||||| || ||||| || ||| | Sbjct 322 CCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 263 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || || ||||| ||| |||| | |||||||||||| ||||| Sbjct 262 AGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGA 203 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | ||| | || || | | ||| | Sbjct 202 ATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACT 143 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| || || || || ||||| || ||||| Sbjct 142 TCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCAT 96 >seq33871 Length=3159 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||| |||||||| || |||||||| || Sbjct 2899 CCGCCACGAAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 2958 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || |||||||||||||| ||| |||| || | ||||||||| || || Sbjct 2959 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 3018 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| |||| | ||| | || || | | || | Sbjct 3019 ATGCCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACT 3078 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| || ||||| ||||| ||||| |||||||| Sbjct 3079 TCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTAACGAAGATCTGCAT 3125 >seq21507 Length=372 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| | ||||| | || | ||| ||||| || || || ||||| || Sbjct 249 GCCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGA 190 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| |||||||| || || || ||||||| | ||||| || || || Sbjct 189 GAGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGATCTGGGGG 130 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || ||||| |||||| || | | || | ||||||| || ||| | Sbjct 129 GATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCAAC 70 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||||||||| Sbjct 69 CTCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 22 >seq18898 Length=402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||| || ||||| || || ||||| ||| Sbjct 77 CCGCCACGAAGACGTAGCACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAA 136 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| | || | |||||||||||| ||||| Sbjct 137 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGA 196 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||| || | || || | Sbjct 197 ATACCCTCCTTGTCTTGGATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACC 256 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || ||||| || || || ||||| ||||| Sbjct 257 TCGAGGGTGATTGTCTTTCCCGTTAGGGTCTTCACAAAAATTTGCAT 303 >seq36087 Length=321 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| | || |||||||| | || |||||||| || || ||||| || Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||| | ||||||||||| || ||| Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| |||||| ||| | | || | ||| || | | ||| | Sbjct 105 ATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACT 46 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGC 131232 || | || | ||| || || || || ||||| || || |||||| Sbjct 45 TCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq28415 Length=359998 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAG 131170 ||||||||||||||||||||| || ||||| ||| | | || |||| | ||| | | Sbjct 102240 CTGCTGGTCCGGAGGGATTCCCTCCTTGTC-CTGAATCTTAGCTTTGACATTCTCGATGG 102298 Query 131171 TATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCT 131230 |||| | || || | |||| ||| | |||||| || || |||||||| |||||||||| Sbjct 102299 TATCCGAGGGTTCAACCTCGAGGGTGATGGTTTTCCCCGTGAGAGTTTTCACGAAAATCT 102358 Query 131231 GCAT 131234 |||| Sbjct 102359 GCAT 102362 >seq10121 Length=1170 Score = 86.0 bits (94), Expect = 6e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929 ||| || ||||| |||||||||||||||||||||| || |||||||||| || ||||| Sbjct 1158 GGGGTTGAAGTGAGCGCCGGCGGACGTGCACCCGTTCGTGTTGTCGCCGAATTCATGCAC 1099 Query 51930 GTGAAAGCCGTG 51941 ||| |||||||| Sbjct 1098 GTGGAAGCCGTG 1087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471656017324800