Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq55175 262 3e-65 seq36087 100 2e-16 seq32636 96.9 3e-15 seq33159 93.3 3e-14 seq27267 89.7 4e-13 >seq55175 Length=171662 Score = 262 bits (290), Expect = 3e-65 Identities = 598/884 (68%), Gaps = 27/884 (3%) Strand=Plus/Minus Query 96132 ACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGCGCGGGTCCACG 96191 || |||||||||||||| |||||||| || || || || | ||| || |||| ||| Sbjct 39958 ACACCAGTCCAGCCGCGTCCGTACATAGCTACACCTACCACAATCTTCTTAGGGTTCACA 39899 Query 96192 CCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGCTCGTTTGGG-TT 96247 |||||| | || || |||||| || || ||| | || || | |||||| || Sbjct 39898 CCTTGA---GCAAGTAAATATTTAACACCAAAATCAGTGGTATA-AGTTTCTTTGGGATT 39843 Query 96248 CCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGACCACGCGCCTTT 96307 ||| || || || || | ||| || | || | ||| ||||| || ||||| Sbjct 39842 CCATGCAGGGGCATATAGGGGAGTCTGATGACCGAGGGTGTCGTTGGACCAGGCACCTTT 39783 Query 96308 AAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGTCGTATTTTAC 96367 || ||||| |||||||| || || | ||| | ||||||| || || ||| | ||| Sbjct 39782 GAAGTCGTAACTCATGAGGAAGATGTGGTCCATATACTTTTGGGCTTCGCTGTAATCTAC 39723 Query 96368 TACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACGTTTTGCCCGT 96427 || ||| || || || ||||| || || || | |||||| | || ||||| Sbjct 39722 GACTTGAATCTTATCCCATCCAGCACTAATAGCTGAGGTGAGCTCGTATTTCTTACCCGT 39663 Query 96428 TTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAGAATGTTGTACGTGT 96486 || | | || ||||| |||||| ||||||| ||||| | ||| || || | Sbjct 39662 TT-CTTCGGAAAGCTCGTTTAACATTTCGCGCAACTCCTTCATTAG----TTCAACATA- 39609 Query 96487 CAGCGTCGCGCTCTTT---GTTGCCGAGCGTCGGG-TTGGCGCCTTTACCGCCCGGAAAT 96542 | | || | ||||| | | || || |||||| || || || |||||||| || ||| Sbjct 39608 -AACTTCTCCATCTTTCGGGCTACCAAG-GTCGGGGTTAGCTCCCTTACCGCCAGGGAAT 39551 Query 96543 TCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTCTGACGGAG 96602 ||||| |||||||| || || ||||| || ||||| || | || ||| | || || Sbjct 39550 TCCCAATCGATGTCAACACCATCGAAGAACTTCCAGGTTTGAAGGAAATCTTTCACAGAA 39491 Query 96603 TCTACAAACACGCGCCGTTTTTCCGCGTC-GTGCATGTAATAGAACGGGTCGGACAGTGT 96661 || || || | ||| || | ||| ||| | | |||| || || | || || Sbjct 39490 TCAACGAAGCGGTCCCGCTTCACTTTGTCAGTGAAAAAGA-AGAAAGGATCAGCAAGAGT 39432 Query 96662 CCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTGGCCGCCATCAA 96721 |||||| || || || || || |||||||||| || |||| |||| | ||||| Sbjct 39431 CCAGCCCCCAATGGAAGGTAGGATTTTAAGGTCCGGCCTAGCTTGTTTAAGGGACATCAG 39372 Query 96722 CTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTTTGCGGTTTTTG 96781 ||||||||| ||||||||||| || || ||||||| ||||| |||||| || || ||||| Sbjct 39371 CTGACCAAAATTGCCTTTGTAAGGTTCATTCCAAGAAGACAAGCCCTTCTGTGGCTTTTG 39312 Query 96782 TACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAGCG 96841 | || |||||||| |||||||| | ||| || |||||| |||||| ||| || || Sbjct 39311 AAGAGCAGCCCAAGGATCGTGAATGGAAACCTTGAAATCTTCACGGCCACTGCATGAACG 39252 Query 96842 TTGCAGCGCTTCAAAACTACC--GGGTATGGTTTTAAGGGCATCGTTAAGGCCGTCGCCG 96899 || || |||| |||||| || | | | ||| || | || || | ||| ||||| Sbjct 39251 CTGAAGAGCTTGAAAACTGCCTTCGATTTCCTTTAAACTG--TCATTGATGCCATCGCCT 39194 Query 96900 CCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCGGCACTTTGTCC 96959 |||||||| || ||||| || ||||| | ||| | || || || | || | || Sbjct 39193 CCACAAATTGGAATAAAACCATACAAAAGATGAGTCAGATTAGGAATTGGTATACGATCG 39134 Query 96960 ACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003 || || || || || || || ||||||||||| || || || Sbjct 39133 ACTGGGAATTTTCGTGGGTAAACACCCCATTCCACGAAGTAAGC 39090 >seq36087 Length=321 Score = 100 bits (110), Expect = 2e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || |||| || | |||||| ||||||||||| || || |||||||| | Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | ||||| || || | || || ||||| ||||| || Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| |||| |||||| | | | |||||| |||||| | Sbjct 105 ATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACT 46 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGC 16933 |||| |||||||| || || || |||||||| ||||| |||||| Sbjct 45 TCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 >seq32636 Length=346 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || || ||||||||||| || ||||| ||||||| | Sbjct 322 CCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 263 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || |||| ||||||||| || | || || ||||| ||||| ||| Sbjct 262 AGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGA 203 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | | ||| || | | | ||||| |||||| | Sbjct 202 ATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACT 143 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||||||| || || || || || || || || |||||| Sbjct 142 TCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq33159 Length=163697 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || || || |||||||| || ||||||||||| | Sbjct 97018 CCTCCACGTAGACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAG 96959 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| |||||||| || | || | || ||| ||||| || Sbjct 96958 AGTGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 96899 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || ||| || || | | | ||||| |||||| Sbjct 96898 ATGCCCTCCTTGTCCTGGATCTTAGCT--TTAACATTTTCAATTGTGTCCGAAGGCTCCA 96841 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 |||| |||||| || || ||||||| || || |||||||||||||| |||| Sbjct 96840 CCTCCAAGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCATCTTGT 96787 >seq27267 Length=86652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 19398 CACGGTTTTCATGTGCACGAGTTTGGTGATACCAGCAACGGGTGCACGTCAGCAGGCGAG 19457 ||||| || || |||||||| || || || | | |||||||||||||| || |||| Sbjct 6884 CACGGCTTCCACGTGCACGAATTCGGCGACAATACAAACGGGTGCACGTCCGCCGGCGCT 6943 Query 19458 CATTTTAACCCCACGCATCAACAGCATGGTGCCCCCGACGCCGCAGAGCGGCACGTTGGT 19517 || || ||||||| | || |||| ||||| ||| |||| | | ||| |||||||| Sbjct 6944 CACTTCAACCCCAACAAGCAGGAGCACGGTGCACCCACCGCCACCGTGCGCCACGTTGGC 7003 Query 19518 GACCTGGGCAAC 19529 ||||| |||||| Sbjct 7004 GACCTCGGCAAC 7015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404789459005300