Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq39759 158 1e-33 seq24324 136 4e-27 seq55115 132 5e-26 seq23677 132 5e-26 seq21599 131 2e-25 seq26680 125 8e-24 >seq39759 Length=128263 Score = 158 bits (174), Expect = 1e-33 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || ||||| || | || || ||||| || || || ||||||||||| ||||||||| Sbjct 66887 ATATAAGTATCAATCAGCAATGAGTACATCTCTGAGTGTACATTCTCCATAGCAATTTGG 66828 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 ||||| || || | || ||||| || || |||||||| ||||||| || || | Sbjct 66827 AATCCATAAAAGAACCTTGCTTCACCAATTTGAACTTCTTGTGAAAATCGTTCCACCAAG 66768 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 |||||||| ||||||||||| || || |||||||| ||||||| ||| || ||||| || Sbjct 66767 TTTTCATTAACTATACCATCAGAAGCAGCAAAAAATGCCAATACATGTTTAATAAAGTGC 66708 Query 93542 TTCTCATCATCTTT-AAGCTTATCCCAATCGGATAGATC 93579 ||||| ||||| || ||| |||||||| |||| ||| Sbjct 66707 CTCTCACAGTCTTTCAAACTT-TCCCAATCTGATAAATC 66670 Score = 152 bits (168), Expect = 6e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || |||| || || | |||||||||||| || | ||| || | || || || ||||| Sbjct 67332 TCATCTCTAGAAATTAGCTCATTGCTGAAAGTCAGACCGGGCATCAAGCCCCGCTTCTTC 67273 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 | ||| |||||||| ||||| || || ||||| || || ||||| || |||||||| || Sbjct 67272 AACCAGAATATTGAGGCAAAGCTTCCGGAAAAGAAGATTCCTTCTACAGCTGCAAAGGCA 67213 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 || || ||||| |||| ||||| | ||||||| ||||||| | ||||| || || Sbjct 67212 ACTATCCGTTCCCCAAAGTTTGCAGTTTTACTGCCAATCCATTGCAGTGCCCAGTCTGCC 67153 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 |||||||| | ||| |||| ||||| || || || |||| | |||||| Sbjct 67152 TTTTTCTTTACACATGGTAAAGTTTCAATTGCATTGAATAAGAAATCTC 67104 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 92924 CTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGT 92983 || ||||| |||||||| |||||||| ||||| | ||||| ||||| || || || || Sbjct 68974 CTGTCAGCAACAAATTCAATGTACTGTGACATTAGTTCACAGTTCATGCCGAGCAGTCGC 68915 Query 92984 ACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT 93043 || || || |||||||||||||| || | ||| ||||| || || || | | || | Sbjct 68914 ACGGGCAGCGCGTCGGTCAAGAACTCCTGCTCAATTACCACCGCATCCCTGATTATCTGC 68855 Query 93044 ATTACTCTACTATTTG-GTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 | || | || ||| ||| ||||| || | || ||| |||| | ||| |||||||| Sbjct 68854 AGCACAC-GCTCCTTGCTTGGCTTTTGAACTAGATGCTTGAACATCAGGCATGCAAAGTC 68796 Query 93103 GGTATGTAAACC 93114 ||||| ||||| Sbjct 68795 TGTATGCAAACC 68784 >seq24324 Length=339539 Score = 136 bits (150), Expect = 4e-27 Identities = 83/87 (95%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 81826 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAGTTGGGAGC 81885 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 81886 GTGGGTTCGAACCCCACACCTGACAAA 81912 Score = 134 bits (148), Expect = 2e-26 Identities = 82/86 (95%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 104266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAGTTGGGAGCG 104207 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 104206 TGGGTTCGAACCCCACACCTGACAAA 104181 Score = 129 bits (142), Expect = 7e-25 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||| ||||||||| |||||||||| | ||||||| Sbjct 90526 GTCAGGTTGGCCGAGTGGTCTAAGGCGCTAGATTTAAGCTCTGGTTCCCAGTTGGGAGCG 90467 Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||||||||||||||||| ||| Sbjct 90466 TGGGTTCGAACCCCACACCTGACAGATT 90439 >seq55115 Length=72579 Score = 132 bits (146), Expect = 5e-26 Identities = 97/111 (87%), Gaps = 4/111 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 14191 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 14250 Query 126323 GTGGGTTCGAACCCCACACCTGAC--AAATTATTATTGGAATTTTTGTTGC 126371 |||||||||||||||||||||||| | ||| || |||| | ||| |||| Sbjct 14251 GTGGGTTCGAACCCCACACCTGACATACATTCTTTTTGGTAATTTCATTGC 14301 Score = 120 bits (132), Expect = 3e-22 Identities = 82/90 (91%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCG--GGAGC 126322 |||||||||||| | |||||||||||||||||||||||| |||||||||| | ||||| Sbjct 15034 AGTCAGGTTGGCAG-GTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 15092 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352 ||||||||||||||||||||||||||| || Sbjct 15093 GTGGGTTCGAACCCCACACCTGACAAAATA 15122 >seq23677 Length=192477 Score = 132 bits (146), Expect = 5e-26 Identities = 85/91 (93%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 126261 TTACA--GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TC 126316 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 2996 TTACAACGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAGTT 2937 Query 126317 GGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||||||||| Sbjct 2936 GGGAGCGTGGGTTCGAACCCCACACCTGACA 2906 >seq21599 Length=164856 Score = 131 bits (144), Expect = 2e-25 Identities = 80/84 (95%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 3097 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAGTTGGGAGCG 3156 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 3157 TGGGTTCGAACCCCACACCTGACA 3180 Score = 131 bits (144), Expect = 2e-25 Identities = 80/84 (95%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 23533 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAGTTGGGAGCG 23474 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 23473 TGGGTTCGAACCCCACACCTGACA 23450 >seq26680 Length=232939 Score = 125 bits (138), Expect = 8e-24 Identities = 83/90 (92%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||| | ||||||||||||| |||||||||| | |||||| Sbjct 26845 AGTCAGGTTGGCCGAGTGGTCTAGGACGCCAGATTTAAGCTCTGGTTCCCAGTTGGGAGC 26904 Query 126323 GTGGGTTCGAACCCCACACCTGACA-AATT 126351 ||||||||||||||||||||||||| |||| Sbjct 26905 GTGGGTTCGAACCCCACACCTGACAGAATT 26934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556439882842800