Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23]
60,470 sequences; 374,815,656 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq36275 114 3e-22
>seq36275
Length=113600
Score = 114 bits (126), Expect = 3e-22
Identities = 220/322 (68%), Gaps = 7/322 (2%)
Strand=Plus/Plus
Query 3161 TGCACGCGCAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAAACTTTGTCA 3220
||||| | ||||||| ||| || | | | |||| |||||| || | || ||| |||
Sbjct 55807 TGCACACTCAAAACTTTTATGCATTCCGTTTCTTTATCTGCGAAGTGTTGAATTTTATCA 55866
Query 3221 ACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTTTGTTGTACG 3280
|||| |||| |||||||| ||| ||| || ||| | | || || || | |||||
Sbjct 55867 ACGTGGTCGGACAGATATACTTTATGGATTTCTTCCTCGACGGCGAGTTCTCCACGTACG 55926
Query 3281 GAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCCCATCCGAACATGACGAACCCCAT 3338
||| | || ||||| | | | ||||| || | ||| || ||||||
Sbjct 55927 GAAGGGACGTAGTGCGCTTCACCGAAATGGAGCCGGAG----GAGCGTGAGGA-CCCCAT 55981
Query 3339 GAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTC 3398
| ||| || || || | | | || ||| || || |||||||| ||||| ||||| |
Sbjct 55982 GGCGCGTGTGTTCCCTAAAGTGACGAAATGCACCTTCCACAAATATGGTCCATCGGGAAC 56041
Query 3399 CCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTA 3458
| || | || | ||| || | ||| | || ||| |||| | |||||||||||||||||
Sbjct 56042 CGTGCAGAAATTCGACGGTTTGTGCGTGCTGCCGCTGAACATCGTCAACGAGAAGATCTA 56101
Query 3459 CATTTTCCTCTGGTTCTGGTTC 3480
| | ||||| ||||||||||||
Sbjct 56102 CGTGTTCCTGTGGTTCTGGTTC 56123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12471745845000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |