Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq36275 114 3e-22 >seq36275 Length=113600 Score = 114 bits (126), Expect = 3e-22 Identities = 220/322 (68%), Gaps = 7/322 (2%) Strand=Plus/Plus Query 3161 TGCACGCGCAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAAACTTTGTCA 3220 ||||| | ||||||| ||| || | | | |||| |||||| || | || ||| ||| Sbjct 55807 TGCACACTCAAAACTTTTATGCATTCCGTTTCTTTATCTGCGAAGTGTTGAATTTTATCA 55866 Query 3221 ACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTTTGTTGTACG 3280 |||| |||| |||||||| ||| ||| || ||| | | || || || | ||||| Sbjct 55867 ACGTGGTCGGACAGATATACTTTATGGATTTCTTCCTCGACGGCGAGTTCTCCACGTACG 55926 Query 3281 GAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCCCATCCGAACATGACGAACCCCAT 3338 ||| | || ||||| | | | ||||| || | ||| || |||||| Sbjct 55927 GAAGGGACGTAGTGCGCTTCACCGAAATGGAGCCGGAG----GAGCGTGAGGA-CCCCAT 55981 Query 3339 GAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTC 3398 | ||| || || || | | | || ||| || || |||||||| ||||| ||||| | Sbjct 55982 GGCGCGTGTGTTCCCTAAAGTGACGAAATGCACCTTCCACAAATATGGTCCATCGGGAAC 56041 Query 3399 CCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTA 3458 | || | || | ||| || | ||| | || ||| |||| | ||||||||||||||||| Sbjct 56042 CGTGCAGAAATTCGACGGTTTGTGCGTGCTGCCGCTGAACATCGTCAACGAGAAGATCTA 56101 Query 3459 CATTTTCCTCTGGTTCTGGTTC 3480 | | ||||| |||||||||||| Sbjct 56102 CGTGTTCCTGTGGTTCTGGTTC 56123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12471745845000