Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq21507 141 2e-28 seq33159 127 5e-24 seq32636 122 2e-22 seq18898 120 7e-22 seq33871 107 5e-18 seq27463 105 2e-17 seq16804 104 6e-17 >seq21507 Length=372 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| | ||| || || || || | || ||||| |||||||| ||||| | | Sbjct 248 CCACCGCGCAATCTGAGCACCAGGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCTGAG 189 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||||| ||||| || || ||||| | | || ||| |||||| Sbjct 188 AGTGTGCGGCCGTCTTCTAGCTGTTTACCCGCAAAGATTAACCTTTGCTGA---TCTGGG 132 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| |||||||| ||||| || | |||| | || Sbjct 131 GGGATTCCCTCCTTGTCTTGGATTTTGGCTTTCACATTTTCGATGGTATCGGAGGGCTCA 72 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 71 ACCTCTAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 22 >seq33159 Length=163697 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||||| | ||| | ||| || || ||||| |||||||| | | Sbjct 97702 CCACCACGCAGACGGAGTACTAAATGGAGTGTGGACTCCTTCTGGATGTTATAGTCTGAG 97643 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| |||||||| || || || || ||||||| || || || |||||| Sbjct 97642 AGTGTGCGTCCATCTTCTAACTGCTTGCCAGCAAAGATCAACCGTTGCTGG---TCTGGG 97586 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| |||||||||||||| || || || || || || | ||| | ||| Sbjct 97585 GGAATACCTTCCTTATCCTGGATTTTAGCCTTGACATTCTCGATGGTATCCGAAGGTTCA 97526 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || |||| ||||| || || || ||||| Sbjct 97525 ACTTCTAGGGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATTTGCAT 97476 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| |||||||| ||||||| || || || |||||| Sbjct 98122 TCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAG 98063 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| || ||||| || ||||||||||| |||||||| Sbjct 98062 ATCAACCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCTTTCACA 98006 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || ||||| || ||||| || || || |||| || || Sbjct 98005 TTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTTTACCAGTCAAGGTTTTT 97946 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 97945 ACGAAGATCTGCAT 97932 >seq32636 Length=346 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || || || | ||| || || ||||| |||||||||| Sbjct 323 TCCACCACGGAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGA 264 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || ||||| || ||||| | |||||| || ||||||||||||||||| || ||| Sbjct 263 CAGGGTGCGACCATCTTCCAGTTGTTTGCCAGCGAAGATCAGACGCTGCTG---GTCTGG 207 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||| || |||||||| ||||| || || || || || | || | || Sbjct 206 AGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTCTCAATGGTGTCCGAAGGCTC 147 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || || || ||||| ||||| || |||||| Sbjct 146 CACTTCCAAGGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATTTGCATT 95 >seq18898 Length=402 Score = 120 bits (132), Expect = 7e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||| ||||||| || ||||| || ||||| | || || || ||||| Sbjct 112 TTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCGAA 171 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||||||||| || | || || || || || || ||||| || || ||||| || Sbjct 172 TATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGGATCTTAGCCTTCACATT 231 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || | |||||| ||||| ||||| ||||| || || || ||||| || Sbjct 232 TTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTTTCCCGTTAGGGTCTTCAC 291 Query 288462 GAATATCTGCATTATG 288477 || || |||||| || Sbjct 292 AAAAATTTGCATTTTG 307 >seq33871 Length=3159 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| |||||||| ||||||| || || || |||||| Sbjct 2935 TCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAG 2994 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| || ||||| || ||||||||||| ||||| || Sbjct 2995 ATCAACCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATTTTAGCTTTGACA 3051 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| ||||| | ||||| || || || || || || || Sbjct 3052 TTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTA 3111 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 3112 ACGAAGATCTGCAT 3125 >seq27463 Length=372575 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| | | |||||||| ||||| || ||||| || ||||| Sbjct 145674 TTCCTTCTGGATGTTGTAGTCCGACAAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAA 145733 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || ||| ||| || || ||||| || || ||||||||||| || || Sbjct 145734 GATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATT 145793 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || | ||| || || | ||| || || || || || || || || || Sbjct 145794 TTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTAAC 145853 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 145854 GAAGATCTGCATT 145866 >seq16804 Length=240 Score = 104 bits (114), Expect = 6e-17 Identities = 116/154 (75%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGG 288384 ||||| || |||||||| || |||||||| |||||| || || || || |||||| Sbjct 232 TGTTTACCAGCGAAGATGAGTCGCTGTTGG---TCTGGGGGAATACCCTCCTTGTCCTGG 176 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || ||||| ||||| || | ||| | |||||||| | ||||| ||||| Sbjct 175 ATCTTAGCCTTCACATTTTCAATGGTATCAGATGGCTCTACTTCCAAAGTGATGGTCTTG 116 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || |||||||| || || ||||||||||||| Sbjct 115 CCAGTAAGAGTCTTCACAAAGATCTGCATTATGT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178740436948660