Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20glaucus_20[genbank_20GCA_5F000931545.1_202015-02-23] 60,470 sequences; 374,815,656 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq33159 120 2e-22 seq27463 107 1e-18 seq33871 104 2e-17 seq18898 104 2e-17 seq32636 96.9 2e-15 seq36087 91.5 1e-13 >seq33159 Length=163697 Score = 120 bits (132), Expect = 2e-22 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || || |||||||| || || || |||||||| || ||||| | || | |||| Sbjct 97912 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC--TGAGAGTGTGCGTCCATCTT 97855 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 ||| || ||||| ||| | ||||| | ||| ||||| ||||| || |||||||| Sbjct 97854 CTAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTT 97795 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| || ||| |||| |||||||| | || || || || || ||||||| Sbjct 97794 GAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAATGTGATGGTTT 97735 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| ||||| ||||||||||| || |||||| Sbjct 97734 TACCAGTCAGTGTTTTTACAAAGATCTGCATA 97703 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||||||||| || || || |||||||| || ||| | | | |||||| Sbjct 98140 ACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCT 98081 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | ||||| | ||| ||||| ||||| ||||||||||| Sbjct 98080 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 98021 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| ||| | || || || || || || || | || ||||||||| Sbjct 98020 ATTTTAGCTTTCACATTCTCAATGGTGTCCGAGGGCTCGACTTCCAGAGTGATGGTTTTA 97961 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| |||||||| || || |||||| Sbjct 97960 CCAGTCAAGGTTTTTACGAAGATCTGCATA 97931 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||||||||| || || || |||||||| || ||| | | | || || Sbjct 97000 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTACGACCATCCTCC 96941 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||| ||| | ||||| | ||| ||||| ||||| || |||||||| Sbjct 96940 AGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 96881 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| |||| || || || | || || || ||||| || || || Sbjct 96880 ATCTTAGCTTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCCAAGGTGATAGTCTTG 96821 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || |||| || || |||||||| ||||| || Sbjct 96820 CCGGTCAATGTCTTCACAAAAATCTGCATCTT 96789 >seq27463 Length=372575 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | || ||||| || ||||| || || || || || |||||||| || Sbjct 145639 CCTCCTCGAAGCCTCAAAACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCCGAC 145698 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||| || |||||||| ||| | ||||| | || || || |||| Sbjct 145699 AAAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGA 145758 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| |||||| ||||||| |||| ||||| || ||| || Sbjct 145759 ATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACC 145818 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||||||||| || || ||||| || || || ||||| Sbjct 145819 TCTAACGTTATGGTTTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 145865 >seq33871 Length=3159 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||||||||| || || || |||||||| || ||| | | | |||||| Sbjct 2917 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGTCCATCTTCT 2976 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | ||||| | ||| ||||| ||||| ||||||||||| Sbjct 2977 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 3036 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| ||| | || || || || | ||| || || ||||| |||||||| Sbjct 3037 ATTTTAGCTTTGACATTCTCAATGGTGTCTGAAGGTTCCACTTCCAAGGTGATGGTTTTG 3096 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || |||||| Sbjct 3097 CCAGTTAGGGTTTTAACGAAGATCTGCATA 3126 >seq18898 Length=402 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||||||||| || || || || ||||| ||| ||| | | | ||||| Sbjct 95 ACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAGTCGGAAAGAGTGCGACCATCTTCC 154 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||||||| |||||| |||||| ||||| ||||| || |||||||| Sbjct 155 AGCTGCTTGCCAGCGAATATCAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGG 214 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| |||| ||||| || |||||| || | ||| || || || Sbjct 215 ATCTTAGCCTTCACATTTTCGATAGTGTCAGAGGCTTCTACCTCGAGGGTGATTGTCTTT 274 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 || || || || || |||||||||||||| || || Sbjct 275 CCCGTTAGGGTCTTCACAAAAATTTGCATTTTGGA 309 >seq32636 Length=346 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || ||||| || ||| || | | | ||||| | |||| Sbjct 298 TGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTGCGACCATCTTCCAGTTGT 239 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | |||| |||||| ||||| ||||| ||||||||||| || || Sbjct 238 TTGCCAGCGAAGATCAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTC 179 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| | || || || || | || || || ||||| ||||||||||| || Sbjct 178 GCCTTTACATTCTCAATGGTGTCCGAAGGCTCCACTTCCAAGGTGATGGTTTTACCAGTG 119 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || || || |||||||| Sbjct 118 AGGGTCTTCACGAAGATTTGCAT 96 >seq36087 Length=321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||||| ||| ||||||||||| || || || || || || || ||||| || | Sbjct 225 CCACCTCGCAGTCTCAAAACTAAATGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAG 166 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | || || | ||||| |||||| | || | ||||| ||||| || Sbjct 165 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCAGGGGGG 106 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||||| || ||| |||| ||||| || || || Sbjct 105 ATGCCCTCCTTGTCTTGGATTTTAGCCTTCACATTTTCAATAGTGTCAGATGGCTCCACT 46 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGC 15174 || || || ||||| || || || || ||||| ||||| || ||| Sbjct 45 TCCAACGTGATGGTCTTGCCCGTAAGCGTTTTCACAAAGATCTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357128609913950